RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RHDQ02161 417 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 MGAT5Q09328 741 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 DNAJC3Q13217 504 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 LRP8Q14114 963 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 GBX1Q14549 363 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 CLCA4Q14CN2 919 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ELOCQ15369 112 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 KBTBD12Q3ZCT8 623 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 CCDC157Q569K6 752 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 RBM20Q5T481 1227 aaKnown RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ARHGAP40Q5TG30 622 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 LYPLAL1Q5VWZ2 237 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 METRNLQ641Q3 311 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 MRNIPQ6NTE8 343 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 IYDQ6PHW0 289 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 LVRNQ6Q4G3 990 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 TAF8Q7Z7C8 310 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 GALNT7Q86SF2 657 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 VRK3Q8IV63 474 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 FSTL5Q8N475 847 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 EIF1ADQ8N9N8 165 aaKnown RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 KYQ8NBH2 561 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 FAM46DQ8NEK8 389 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 GPR156Q8NFN8 814 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 SPDYE1Q8NFV5 336 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 OR2L2Q8NH16 312 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 GIMAP7Q8NHV1 300 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 HEXDCQ8WVB3 486 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 FAM136AQ96C01 138 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 MED8Q96G25 268 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 DCUN1D1Q96GG9 259 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ZNF514Q96K75 400 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 APOLD1Q96LR9 279 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 SLC30A3Q99726 388 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 NRTNQ99748 197 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 FUT8Q9BYC5 575 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 GSDMCQ9BYG8 508 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 OR52A5Q9H2C5 316 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 CDC42EP4Q9H3Q1 356 aaKnown RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 NLGN3Q9NZ94 848 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 ZNF624Q9P2J8 865 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 RABGEF1Q9UJ41 708 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 CDYLQ9Y232 598 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 DNAJC16Q9Y2G8 782 aa6.85□□□□□ -1.31
LIMD1-204ENST00000474665 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
LIMD1-204ENST00000474665 C2CD3Q4AC94 2353 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 TRBV23OR9-2A0A075B6M9 112 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 C17orf113A0A1B0GUU1 675 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 SLC5A10A0PJK1 596 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 OR52A4PA6NMU1 304 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 CFAP99D6REC4 459 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 TERTO14746 1132 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 PPM1DO15297 605 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 FLRT2O43155 660 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 GPC4O75487 556 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 NDUFS3O75489 264 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 FAM155BO75949 473 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ACSL3O95573 720 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ANXA6P08133 673 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ITGB6P18564 788 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 RPL10P27635 214 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ACADLP28330 430 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 PBLDP30039 288 aaPredicted RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 GRK6P43250 576 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 PREPP48147 710 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 CLCN7P51798 805 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 CDKN2DP55273 166 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 MAZP56270 477 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 CLDN6P56747 220 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 UBE2IP63279 158 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ILF3Q12906 894 aaKnown RBP eCLIP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 NFATC3Q12968 1075 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 THOC5Q13769 683 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 UAP1Q16222 522 aaPredicted RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 INSCQ1MX18 579 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 AARS2Q5JTZ9 985 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 C6orf132Q5T0Z8 1188 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 CAPRIN2Q6IMN6 1127 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 WDR93Q6P2C0 686 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ZNF449Q6P9G9 518 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ABRAXAS1Q6UWZ7 409 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 WASH2PQ6VEQ5 465 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 KIAA0408Q6ZU52 694 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 SDCCAG8Q86SQ7 713 aaPredicted RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ZC3HC1Q86WB0 502 aaKnown RBP6.84□□□□□ -1.31
LIMD1-204ENST00000474665 GKN2Q86XP6 184 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 SPACA3Q8IXA5 215 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 PALM2Q8IXS6 379 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 CFAP206Q8IYR0 622 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 SDR16C5Q8N3Y7 309 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 SFRP1Q8N474 314 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 ARL14Q8N4G2 192 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 OTUD6BQ8N6M0 293 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 RHBDD1Q8TEB9 315 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 SLC37A2Q8TED4 501 aa6.84□□□□□ -1.31
LIMD1-204ENST00000474665 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms