RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 METTL6Q8TCB7 284 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 MICAL1Q8TDZ2 1067 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 NAT14Q8WUY8 206 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 GATA6Q92908 595 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 USP7Q93009 1102 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ZUFSPQ96AP4 578 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 RSPRY1Q96DX4 576 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SPDL1Q96EA4 605 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 BTBD9Q96Q07 612 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 UHRF1Q96T88 793 aaPredicted RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 ACOX2Q99424 681 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SLC12A9Q9BXP2 914 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 TRIM54Q9BYV2 358 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SLC29A3Q9BZD2 475 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 KLHL4Q9C0H6 718 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 MUC13Q9H3R2 512 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 IPPKQ9H8X2 491 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 PCDH12Q9NPG4 1184 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 GID8Q9NWU2 228 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 OBP2AQ9NY56 170 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 WWOXQ9NZC7 414 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 ADA2Q9NZK5 511 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 OPTCQ9UBM4 332 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 SLC8A2Q9UPR5 921 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 PDE10AQ9Y233 779 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 MRPS23Q9Y3D9 190 aaKnown RBP9.63□□□□□ -0.87
USP39-214ENST00000474572 PCDHA9Q9Y5H5 950 aa9.63□□□□□ -0.87
USP39-214ENST00000474572 FAM234BA2RU67 622 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ARNTLO00327 626 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 IFRD1O00458 451 aaPredicted RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 ANGPT2O15123 496 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 BNIP3LO60238 219 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 SLC22A3O75751 556 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 CSPG5O95196 566 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 EN2P19622 333 aaPredicted RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 SLC6A2P23975 617 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 PEX2P28328 305 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 IL12AP29459 219 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 HMOX2P30519 316 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 MMP12P39900 470 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 SLC7A2P52569 658 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 LBX1P52954 281 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ERVK-21P61565 698 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 KLC1Q07866 573 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 BNIP2Q12982 314 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 KCNC3Q14003 757 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 KIAA0040Q15053 153 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 FXNQ16595 210 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 DUSP6Q16828 381 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ARSIQ5FYB1 569 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 TCEAL5Q5H9L2 206 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 LCN8Q6JVE9 175 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 IL27RAQ6UWB1 636 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 MILR1Q7Z6M3 343 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 C12orf40Q86WS4 652 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 SLC15A3Q8IY34 581 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 C7orf61Q8IZ16 206 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 NRSN1Q8IZ57 195 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 LILRA2Q8N149 483 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 DPP10Q8N608 796 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 RNF148Q8N7C7 305 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 TMEM102Q8N9M5 508 aaPredicted RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 HIPK4Q8NE63 616 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 CATSPER1Q8NEC5 780 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 PROKR1Q8TCW9 393 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 CYB5D2Q8WUJ1 264 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ASB11Q8WXH4 323 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 MYLIPQ8WY64 445 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ING5Q8WYH8 240 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 PPP2R3CQ969Q6 453 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 TEX37Q96LM6 180 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 PPP3R2Q96LZ3 170 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 NR1H4Q96RI1 486 aaPredicted RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 EGFL8Q99944 293 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 FAM83DQ9H4H8 585 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 ACTL8Q9H568 366 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 SLC32A1Q9H598 525 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 DUS2Q9NX74 493 aaKnown RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 EPS15L1Q9UBC2 864 aa9.62□□□□□ -0.87
USP39-214ENST00000474572 MBD1Q9UIS9 605 aaPredicted RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 LEF1Q9UJU2 399 aaPredicted RBP9.62□□□□□ -0.87
USP39-214ENST00000474572 ANKRD12Q6UB98 2062 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 KCNE1BA0A087WTH5 132 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 A6NHS1 94 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 AQP12BA6NM10 295 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 FADS2P1A8MWK0 482 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 H0Y858 1186 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SLC28A1O00337 649 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SPINT1O43278 529 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SYNCRIPO60506 623 aaKnown RBP9.61□□□□□ -0.87
USP39-214ENST00000474572 TULP3O75386 442 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 KATNA1O75449 491 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 STK16O75716 305 aa9.61□□□□□ -0.87
USP39-214ENST00000474572 SMNDC1O75940 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
USP39-214ENST00000474572 NFATC1O95644 943 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms