RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 BANF1O75531 89 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 MPOP05164 745 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 C1QTNF9P0C862 333 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 JMJD7P0C870 316 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 PDHA2P29803 388 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 CSTF2P33240 577 aaKnown RBP eCLIP13.43□□□□□ -0.26
USF1-205ENST00000473969 LIMK2P53671 638 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 PLTPP55058 493 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 GABREP78334 506 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 CYP4F3Q08477 520 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 CTBP1Q13363 440 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 RTP5Q14D33 572 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 MSS51Q4VC12 460 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 HSP90AA5PQ58FG0 334 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 SNAP47Q5SQN1 464 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 HP1BP3Q5SSJ5 553 aaPredicted RBP13.43□□□□□ -0.26
USF1-205ENST00000473969 DUPD1Q68J44 220 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 WDR74Q6RFH5 385 aaPredicted RBP13.43□□□□□ -0.26
USF1-205ENST00000473969 RAB11FIP2Q7L804 512 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 B3GNT8Q7Z7M8 397 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 KRT222Q8N1A0 295 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 AGGF1Q8N302 714 aaeCLIP13.43□□□□□ -0.26
USF1-205ENST00000473969 FBXO39Q8N4B4 442 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 CEP112Q8N8E3 955 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
USF1-205ENST00000473969 RMDN2Q96LZ7 410 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 PWWP2AQ96N64 755 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 P2RY12Q9H244 342 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 OR52A5Q9H2C5 316 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 SEMA6CQ9H3T2 930 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 MVB12BQ9H7P6 319 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 POLR1BQ9H9Y6 1135 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 ASF1AQ9Y294 204 aa13.43□□□□□ -0.26
USF1-205ENST00000473969 EPG5Q9HCE0 2579 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ASXL3Q9C0F0 2248 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 PRAMEF33A0A0G2JMD5 474 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 SLC5A10A0PJK1 596 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 IQCF5A8MTL0 148 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 HGSO14964 777 aaPredicted RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 EIF3HO15372 352 aaKnown RBP eCLIP13.42□□□□□ -0.26
USF1-205ENST00000473969 RPN2P04844 631 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 PKMP14618 531 aaKnown RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 MPSTP25325 297 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 CCR7P32248 378 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 LSSP48449 732 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ADARP55265 1226 aaKnown RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 ZFP36L1Q07352 338 aaKnown RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 PRKAA1Q13131 559 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 TTC23LQ6PF05 361 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 NAPRTQ6XQN6 538 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 PDZD3Q86UT5 571 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ANKMY2Q8IV38 441 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 SLITRK4Q8IW52 837 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ZBED8Q8IZ13 594 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 FBXO36Q8NEA4 188 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ACVR1CQ8NER5 493 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 PYROXD1Q8WU10 500 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 SKA2Q8WVK7 121 aaPredicted RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 LPGAT1Q92604 370 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 CERS2Q96G23 380 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ZDHHC12Q96GR4 267 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 CCDC74BQ96LY2 380 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 FOPNLQ96NB1 174 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 CNTNAP3BQ96NU0 1288 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 LRRC1Q9BTT6 524 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 CNTNAP3Q9BZ76 1288 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 TRIT1Q9H3H1 467 aaKnown RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 KIR3DX1Q9H7L2 352 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 FBXO6Q9NRD1 293 aaPredicted RBP13.42□□□□□ -0.26
USF1-205ENST00000473969 KLHL3Q9UH77 587 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 FBXO5Q9UKT4 447 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 SATB2Q9UPW6 733 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 COMMD10Q9Y6G5 202 aa13.42□□□□□ -0.26
USF1-205ENST00000473969 ZFC3H1O60293 1989 aaKnown RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 RP1P56715 2156 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 IGHV5-10-1A0A0J9YXX1 117 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 A8MU76 341 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 AGRPO00253 132 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 PLD2O14939 933 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 RASSF9O75901 435 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 S1PR4O95977 384 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 ERVK-10P10266 1014 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 AOAHP28039 575 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 SLC1A2P43004 574 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 CARSP49589 748 aaKnown RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 PDX1P52945 283 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 ZNF658BQ4V348 819 aaPredicted RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 IRGCQ6NXR0 463 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 DUS1LQ6P1R4 473 aaKnown RBP13.41□□□□□ -0.26
USF1-205ENST00000473969 UNC5AQ6ZN44 842 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 OOSP2Q86WS3 158 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 DENND6AQ8IWF6 608 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 MMGT1Q8N4V1 131 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 AGBL5Q8NDL9 886 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 PHC3Q8NDX5 983 aa13.41□□□□□ -0.26
USF1-205ENST00000473969 CFAP61Q8NHU2 1237 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms