RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SLC40A1Q9NP59 571 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 CLCA2Q9UQC9 943 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 HEBP2Q9Y5Z4 205 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 COLEC10Q9Y6Z7 277 aa12.14□□□□□ -0.47
DDX56-209ENST00000473924 MED19A0JLT2 244 aaPredicted RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 SLC5A10A0PJK1 596 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 B4GAT1O43505 415 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 TCEA3O75764 348 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 TOP3BO95985 862 aaKnown RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 MT-CO3P00414 261 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 GSTA2P09210 222 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 AOAHP28039 575 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 CD151P48509 253 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 GPLD1P80108 840 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 GPR18Q14330 331 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 MAP9Q49MG5 647 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 ZNF658BQ4V348 819 aaPredicted RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 CAPRIN2Q6IMN6 1127 aaKnown RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 XKR5Q6UX68 686 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 RBM44Q6ZP01 1051 aaKnown RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 TMEM26Q6ZUK4 368 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 TMPRSS7Q7RTY8 843 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 PDZD3Q86UT5 571 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 PIM3Q86V86 326 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 LRRN4CLQ8ND94 238 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 SKA2Q8WVK7 121 aaPredicted RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 TFGQ92734 400 aaPredicted RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 CDKL2Q92772 493 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 DEPDC7Q96QD5 511 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 FERD3LQ96RJ6 166 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 SCNM1Q9BWG6 230 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 NSMCE4AQ9NXX6 385 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 MOCS1Q9NZB8 636 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 TXNDC16Q9P2K2 825 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 SLC17A6Q9P2U8 582 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 ATXN7L1Q9ULK2 861 aaPredicted RBP12.13□□□□□ -0.47
DDX56-209ENST00000473924 COMMD10Q9Y6G5 202 aa12.13□□□□□ -0.47
DDX56-209ENST00000473924 IGHV1OR21-1A0A087WYE8 117 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 A0A1W2PQM1 296 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 FAM149AA5PLN7 773 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 LILRA5A6NI73 299 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 NTN3O00634 580 aaPredicted RBP12.12□□□□□ -0.47
DDX56-209ENST00000473924 CASC3O15234 703 aaKnown RBP12.12□□□□□ -0.47
DDX56-209ENST00000473924 DUX1O43812 170 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 VPS26AO75436 327 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 SPAG6O75602 509 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 CPNE6O95741 557 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 AHSGP02765 367 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 AMD1P17707 334 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 SPINK2P20155 84 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 NDUFS1P28331 727 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 EPHA4P54764 986 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 TARDBPQ13148 414 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDX56-209ENST00000473924 TTLL9Q3SXZ7 439 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 PLEKHS1Q5SXH7 462 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 NKAIN2Q5VXU1 208 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 USP53Q70EK8 1073 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 SLC22A15Q8IZD6 547 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 ZBTB2Q8N680 514 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 PHC3Q8NDX5 983 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 KCNJ9Q92806 393 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 TBC1D10AQ9BXI6 508 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 UCK1Q9HA47 277 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 LRRC4CQ9HCJ2 640 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 ASF1AQ9Y294 204 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 ASXL3Q9C0F0 2248 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 RP1P56715 2156 aa12.12□□□□□ -0.47
DDX56-209ENST00000473924 TCRBV9S1A1TA0A576 114 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 D6RAR5 112 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
DDX56-209ENST00000473924 GPC4O75487 556 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 UBXN7O94888 489 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 CD1CP29017 333 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 STX2P32856 288 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 PHBP35232 272 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 ABCG1P45844 678 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 GPX6P59796 221 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 CDCP2Q5VXM1 449 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 UGT3A1Q6NUS8 523 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 ZNF549Q6P9A3 640 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 STRA8Q7Z7C7 330 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 GALNT7Q86SF2 657 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 SLC26A11Q86WA9 606 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 VRK3Q8IV63 474 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 CFAP61Q8NHU2 1237 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 JPH3Q8WXH2 748 aaPredicted RBP12.11□□□□□ -0.47
DDX56-209ENST00000473924 NCSTNQ92542 709 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 ATXN7L3BQ96GX2 97 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 NDNQ99608 321 aa12.11□□□□□ -0.47
DDX56-209ENST00000473924 AARSD1Q9BTE6 412 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms