RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 ANAPC5Q9UJX4 755 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 CLCA2Q9UQC9 943 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 CDYLQ9Y232 598 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 ENTPD2Q9Y5L3 495 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 FAM169AQ9Y6X4 670 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 C17orf113A0A1B0GUU1 675 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 ESYT3A0FGR9 886 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 SLC5A10A0PJK1 596 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 RHPN2P1A8MT19 583 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 D6RAR5 112 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 CFAP99D6REC4 459 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 ERVH48-1M5A8F1 160 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 CSO75390 466 aaKnown RBP12.82□□□□□ -0.36
TPM3-216ENST00000473036 S1PR4O95977 384 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 PGAM1P18669 254 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 GABRB3P28472 473 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 CCR7P32248 378 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 UCNP55089 124 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 CTBP1Q13363 440 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 ISXQ2M1V0 245 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 AMZ1Q400G9 498 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 LYPLAL1Q5VWZ2 237 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 NEPROQ6NW34 567 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 TRMT10BQ6PF06 316 aaKnown RBP12.82□□□□□ -0.36
TPM3-216ENST00000473036 CERS6Q6ZMG9 384 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 UNC5AQ6ZN44 842 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 USP53Q70EK8 1073 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 ANKMY2Q8IV38 441 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 SLITRK4Q8IW52 837 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 SEC14L1Q92503 715 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 CRELD1Q96HD1 420 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 SEMA6CQ9H3T2 930 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 EVA1BQ9NVM1 165 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 SAMD15Q9P1V8 674 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 CHMP2BQ9UQN3 213 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 MED16Q9Y2X0 877 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 ATMQ13315 3056 aa12.82□□□□□ -0.36
TPM3-216ENST00000473036 OR5K4A6NMS3 321 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 PRMT5O14744 637 aaPredicted RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 ERVK-10P10266 1014 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 RPS3P23396 243 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM3-216ENST00000473036 ITPKBP27987 946 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 SLC1A2P43004 574 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 GPR3P46089 330 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 TTPAP49638 278 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 MPP1Q00013 466 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 TIAL1Q01085 375 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM3-216ENST00000473036 ZFP36L1Q07352 338 aaKnown RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 GPR18Q14330 331 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 BRD3Q15059 726 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 HIF1AQ16665 826 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 HSP90AA5PQ58FG0 334 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 TEX35Q5T0J7 233 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 STEAP4Q687X5 459 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 ZNF549Q6P9A3 640 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 SLC9B2Q86UD5 537 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 ART4Q93070 314 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 ATXN7L3BQ96GX2 97 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 PRR11Q96HE9 360 aaPredicted RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 ABCG4Q9H172 646 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 SYNDIG1Q9H7V2 258 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 EPB41L5Q9HCM4 733 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 FBXO6Q9NRD1 293 aaPredicted RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 C20orf96Q9NUD7 363 aaPredicted RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 MTRF1LQ9UGC7 380 aaKnown RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 DMGDHQ9UI17 866 aaKnown RBP12.81□□□□□ -0.36
TPM3-216ENST00000473036 ACSL5Q9ULC5 683 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 CRYL1Q9Y2S2 319 aa12.81□□□□□ -0.36
TPM3-216ENST00000473036 J3QKU1 62 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 NIPSNAP2O75323 286 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 GPC4O75487 556 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 TCEA3O75764 348 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 TPBGLP0DKB5 382 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 MTHFD1P11586 935 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 VCLP18206 1134 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 OGNP20774 298 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 MPSTP25325 297 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 ACADLP28330 430 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 FMO4P31512 558 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 PPP1CAP62136 330 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 RHDQ02161 417 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 PDIA2Q13087 525 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 SPIDRQ14159 915 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 DNAJC21Q5F1R6 531 aaKnown RBP12.8□□□□□ -0.36
TPM3-216ENST00000473036 ZNF470Q6ECI4 717 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 PDIK1LQ8N165 341 aa12.8□□□□□ -0.36
TPM3-216ENST00000473036 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
TPM3-216ENST00000473036 PHC3Q8NDX5 983 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms