RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 MGAT4DA6NG13 374 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 PRR19A6NJB7 356 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 PRMT5O14744 637 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 GIPC1O14908 333 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 NOBOXO60393 691 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 SNX2O60749 519 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 POP7O75817 140 aaKnown RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 DKK1O94907 266 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 SLU7O95391 586 aaKnown RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 LDOC1O95751 146 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 EML2O95834 649 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 OR56A5P0C7T3 313 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 VCLP18206 1134 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 ECHS1P30084 290 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 SSTR1P30872 391 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 MAGEA4P43358 317 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 CARSP49589 748 aaKnown RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 MPP1Q00013 466 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 DNAJC3Q13217 504 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 CTBP1Q13363 440 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 CUL1Q13616 776 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 NFE2L1Q14494 772 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 SEPT7Q16181 437 aaKnown RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 ZNF789Q5FWF6 425 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 RNF187Q5TA31 235 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 FAM83HQ6ZRV2 1179 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 SDCCAG8Q86SQ7 713 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 AMZ2Q86W34 360 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 CILP2Q8IUL8 1156 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 PALM2Q8IXS6 379 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 LMNTD2Q8IXW0 634 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 IFT20Q8IY31 132 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 NAGSQ8N159 534 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 GSDMBQ8TAX9 411 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 HM13Q8TCT9 377 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 LKAAEAR1Q8TD35 194 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 CALML6Q8TD86 181 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 LPGAT1Q92604 370 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 LINC00615Q96LM1 132 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 C9orf72Q96LT7 481 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 CDC6Q99741 560 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 FAM167BQ9BTA0 163 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 PPANQ9NQ55 473 aaKnown RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 FBXO6Q9NRD1 293 aaPredicted RBP8.92□□□□□ -0.98
SMC4-214ENST00000472991 DLL3Q9NYJ7 618 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 SLC17A6Q9P2U8 582 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 GULP1Q9UBP9 304 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 TBC1D29Q9UFV1 150 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 FBXO5Q9UKT4 447 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 U3KQA8 63 aa8.92□□□□□ -0.98
SMC4-214ENST00000472991 TRBV23OR9-2A0A075B6M9 112 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 SPAARA0A1B0GVQ0 90 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 A6NCN8 305 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 PDZK1P1A8MUH7 402 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 QSOX1O00391 747 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 PFDN6O15212 129 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 TNFSF14O43557 240 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 AP2A2O94973 939 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 KCNK5O95279 499 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 FTH1P02794 183 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 ITGB6P18564 788 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 IDSP22304 550 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 RPS3P23396 243 aaKnown RBP eCLIP8.91□□□□□ -0.987e-64■■■■■ 337.8
SMC4-214ENST00000472991 RPL10P27635 214 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 FMO4P31512 558 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 CLCNKAP51800 687 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 MAZP56270 477 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 DMPKQ09013 629 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 BOP1Q14137 746 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 PUM1Q14671 1186 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMC4-214ENST00000472991 NR0B2Q15466 257 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 TRIP6Q15654 476 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 CCDC157Q569K6 752 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 CTSL3PQ5NE16 218 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 PTRHD1Q6GMV3 140 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 GUSBP11Q6P575 273 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 XKR5Q6UX68 686 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 GSPT2Q8IYD1 628 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 KRT222Q8N1A0 295 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 LILRA3Q8N6C8 439 aaPredicted RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 ARL10Q8N8L6 244 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 FAM181AQ8N9Y4 354 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 GPR156Q8NFN8 814 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 OR2L2Q8NH16 312 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 GABPB2Q8TAK5 448 aaPredicted RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 SLC37A2Q8TED4 501 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 GLMNQ92990 594 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 TCF12Q99081 682 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 CCM2Q9BSQ5 444 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 P2RY12Q9H244 342 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 COG4Q9H9E3 785 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 VPS37BQ9H9H4 285 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 PRDM8Q9NQV8 689 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 INTS10Q9NVR2 710 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 NOP53Q9NZM5 478 aaKnown RBP8.91□□□□□ -0.98
SMC4-214ENST00000472991 GNPTGQ9UJJ9 305 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 PSMD13Q9UNM6 376 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 CRYL1Q9Y2S2 319 aa8.91□□□□□ -0.98
SMC4-214ENST00000472991 SPEGQ15772 3267 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms