RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ATP1A4Q13733 1029 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 PTCHD3Q3KNS1 767 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 DNTTIP2Q5QJE6 756 aaKnown RBP9.07□□□□□ -0.96
VCL-204ENST00000472585 VWA5B1Q5TIE3 1220 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 METRNLQ641Q3 311 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 ZNF385CQ66K41 422 aaPredicted RBP9.07□□□□□ -0.96
VCL-204ENST00000472585 NT5DC3Q86UY8 548 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 AMZ2Q86W34 360 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 KMT5CQ86Y97 462 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 TRAPPC5Q8IUR0 188 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 TMEM126BQ8IUX1 230 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 ANKRD20A12PQ8NF67 263 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 TM9SF4Q92544 642 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 TRIM11Q96F44 468 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 POM121Q96HA1 1249 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 LRFN5Q96NI6 719 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 AGAP3Q96P47 875 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 RNF157Q96PX1 679 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 ZNF670Q9BS34 389 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 ANO10Q9NW15 660 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 UBP1Q9NZI7 540 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 BTRCQ9Y297 605 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 SPG11Q96JI7 2443 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 CNTRLQ7Z7A1 2325 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 SEC16AO15027 2179 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 A0A1B0GUH1 482 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 LOC285095A0A1B0GVY8 99 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 UBA6A0AVT1 1052 aaPredicted RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 OR2AG2A6NM03 316 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 MYO1FO00160 1098 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 CNOT3O75175 753 aaKnown RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 MTHFD1P11586 935 aaKnown RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 POLR2CP19387 275 aaPredicted RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 CA4P22748 312 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 HMGCLP35914 325 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 SSR1P43307 286 aaKnown RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 CHRNA4P43681 627 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 NR1I3Q14994 352 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 PDK2Q15119 407 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 KDELC1Q6UW63 502 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 FJX1Q86VR8 437 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 ZADH2Q8N4Q0 377 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 OLFM3Q96PB7 478 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 PACSIN1Q9BY11 444 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 WWP1Q9H0M0 922 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 SLC25A51Q9H1U9 297 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 ZNF552Q9H707 407 aaPredicted RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 IMP3Q9NV31 184 aaKnown RBP9.06□□□□□ -0.96
VCL-204ENST00000472585 IL17CQ9P0M4 197 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 SLC24A2Q9UI40 661 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 CSAG2Q9Y5P2 127 aa9.06□□□□□ -0.96
VCL-204ENST00000472585 ABCA2Q9BZC7 2435 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 H3BMH7 237 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 BTN3A3O00478 584 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 PMPCBO75439 489 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 IPO13O94829 963 aaKnown RBP9.05□□□□□ -0.96
VCL-204ENST00000472585 PROSCO94903 275 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 ZBTB11O95625 1053 aaPredicted RBP9.05□□□□□ -0.96
VCL-204ENST00000472585 NDST3O95803 873 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 SNRPB2P08579 225 aaKnown RBP9.05□□□□□ -0.96
VCL-204ENST00000472585 COX6B1P14854 86 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 PVRP15151 417 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 ST6GAL1P15907 406 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 MX2P20592 715 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 GSDMDP57764 484 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 AP1B1Q10567 949 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 ART3Q13508 389 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 STX1AQ16623 288 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 HADHQ16836 314 aaKnown RBP9.05□□□□□ -0.96
VCL-204ENST00000472585 GPRC6AQ5T6X5 926 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 SLC9A4Q6AI14 798 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 SASS6Q6UVJ0 657 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 FAM151BQ6UXP7 276 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 CUZD1Q86UP6 607 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 RAB43Q86YS6 212 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 PARP9Q8IXQ6 854 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 CLEC1AQ8NC01 280 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 DDHD1Q8NEL9 900 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 OR4E2Q8NGC2 313 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 GDAP1Q8TB36 358 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 DTX3LQ8TDB6 740 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 RMDN2Q96LZ7 410 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 CD180Q99467 661 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 SPSB2Q99619 263 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 KLHL25Q9H0H3 589 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 GLOD4Q9HC38 313 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 CHST11Q9NPF2 352 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 RAD18Q9NS91 495 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 SAE1Q9UBE0 346 aaPredicted RBP9.05□□□□□ -0.96
VCL-204ENST00000472585 HEY1Q9Y5J3 304 aa9.05□□□□□ -0.96
VCL-204ENST00000472585 ANKHD1Q8IWZ3 2542 aaKnown RBP9.05□□□□□ -0.96
VCL-204ENST00000472585 AKAP9Q99996 3911 aa9.04□□□□□ -0.96
VCL-204ENST00000472585 TMEM150CB9EJG8 249 aa9.04□□□□□ -0.96
VCL-204ENST00000472585 KCNJ13O60928 360 aa9.04□□□□□ -0.96
VCL-204ENST00000472585 CBSLP0DN79 551 aa9.04□□□□□ -0.96
VCL-204ENST00000472585 PTPN3P26045 913 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms