RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 NEMP2A6NFY4 417 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 EIF3FO00303 357 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TRIM38O00635 465 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 RGS16O15492 202 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 PRICKLE3O43900 615 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 SPAG7O75391 227 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 KRT37O76014 449 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 C1orf105O95561 183 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ASMTLO95671 621 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 GSTM1P09488 218 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 CCDC166P0CW27 439 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ERGP11308 486 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 COL6A2P12110 1019 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 JUNDP17535 347 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 EPORP19235 508 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 CHRM3P20309 590 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TYK2P29597 1187 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 SKIV2L2P42285 1042 aaKnown RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 GSTM4Q03013 218 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 PPARDQ03181 441 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 RPA4Q13156 261 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 BOP1Q14137 746 aaKnown RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 CSHL1Q14406 222 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TSNQ15631 228 aaKnown RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 INSCQ1MX18 579 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 C18orf21Q32NC0 220 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 DUS1LQ6P1R4 473 aaKnown RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 IYDQ6PHW0 289 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ZC3H14Q6PJT7 736 aaKnown RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 LVRNQ6Q4G3 990 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 AMZ2Q86W34 360 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TRAPPC5Q8IUR0 188 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 HID1Q8IV36 788 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 SRRM1Q8IYB3 904 aaKnown RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 FBXO15Q8NCQ5 510 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ZNF548Q8NEK5 533 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 FLVCR1-AS1Q8TAF5 88 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 MDM1Q8TC05 714 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TCP10LQ8TDR4 215 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ELMO1Q92556 727 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 LINGO1Q96FE5 620 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 DCUN1D1Q96GG9 259 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ELF4Q99607 663 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-207ENST00000471342 CCDC77Q9BR77 488 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 SLC12A9Q9BXP2 914 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 C20orf27Q9GZN8 174 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ARRDC1-AS1Q9H2J1 176 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 PCMTD2Q9NV79 361 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 TAAR2Q9P1P5 351 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ZNHIT2Q9UHR6 403 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 PDE10AQ9Y233 779 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 ACOT9Q9Y305 439 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 PCDHGA5Q9Y5G8 931 aa9.66□□□□□ -0.86
SF3A1-207ENST00000471342 WDR87Q6ZQQ6 2873 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 A0A087X1B8 175 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 A0A1B0GTL3 188 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 A0A1W2PPV9 198 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 LNP1A1A4G5 178 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 LRRC14BA6NHZ5 514 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 TK2O00142 265 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 LIN7AO14910 233 aaPredicted RBP9.65□□□□□ -0.86
SF3A1-207ENST00000471342 DLX3O60479 287 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 KCNJ13O60928 360 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 VPS26AO75436 327 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 RASGRP1O95267 797 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 FTH1P02794 183 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 MT-ND3P03897 115 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 LTA4HP09960 611 aaKnown RBP9.65□□□□□ -0.86
SF3A1-207ENST00000471342 MYZAPP0CAP1 466 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 CBSLP0DN79 551 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 SAT1P21673 171 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 KELP23276 732 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 RPL10P27635 214 aaKnown RBP9.65□□□□□ -0.86
SF3A1-207ENST00000471342 CBSP35520 551 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 MPLP40238 635 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 IFFO1Q0D2I5 559 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 HSPA14Q0VDF9 509 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 ILF2Q12905 390 aaKnown RBP9.65□□□□□ -0.86
SF3A1-207ENST00000471342 PTK2BQ14289 1009 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 RPE65Q16518 533 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 DUOXA1Q1HG43 343 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 HLA-BQ31612 363 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 UAP1L1Q3KQV9 507 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.65□□□□□ -0.86
SF3A1-207ENST00000471342 PDZD3Q86UT5 571 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 GALNT13Q8IUC8 556 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 KLHDC8AQ8IYD2 350 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 RGL4Q8IZJ4 473 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 SFRP1Q8N474 314 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 OTUD6BQ8N6M0 293 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 LINC01555Q8NAE3 123 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 PHC3Q8NDX5 983 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 GPR156Q8NFN8 814 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 RHEBL1Q8TAI7 183 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 PANX3Q96QZ0 392 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 SLC13A1Q9BZW2 595 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 WWP1Q9H0M0 922 aa9.65□□□□□ -0.86
SF3A1-207ENST00000471342 VPS11Q9H270 941 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms