RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 CEACAM4O75871 244 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 LCA5LO95447 670 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 PRAMEF1O95521 474 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 RALBP11234 206 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CDC25BP30305 580 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CD68P34810 354 aaPredicted RBP13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 SLC1A1P43005 524 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CHRNA4P43681 627 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 KPNA2P52292 529 aaKnown RBP13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 ADCY2Q08462 1091 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 LAMB3Q13751 1172 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 TCEAL1Q15170 157 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 PLEKHS1Q5SXH7 462 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 KAZNQ674X7 775 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 ZNF517Q6ZMY9 492 aaPredicted RBP13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 MED25Q71SY5 747 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 RAB43Q86YS6 212 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CCDC170Q8IYT3 715 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 FDCSPQ8NFU4 85 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 ADAMTS17Q8TE56 1095 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 SGSM3Q96HU1 749 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 MRGPRX2Q96LB1 330 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 FCRL5Q96RD9 977 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 VAT1Q99536 393 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CHP1Q99653 195 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CCM2Q9BSQ5 444 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 ACTR5Q9H9F9 607 aaPredicted RBP13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 LUZP4Q9P127 313 aa13.5□□□□□ -0.25
SEMA3F-208ENST00000470737 CACNA1DQ01668 2161 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 GSAPA4D1B5 854 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SLC9B1P1A6NJY1 282 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 C2orf81A6NN90 581 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 TMEM150CB9EJG8 249 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 CST8O60676 142 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 POLBP06746 335 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 AGXTP21549 392 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 PREPP48147 710 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 WASHC5Q12768 1159 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 EIF2S3LQ2VIR3 472 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 ZC3H18Q86VM9 953 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SYTL1Q8IYJ3 562 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SLC38A9Q8NBW4 561 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 OR4E2Q8NGC2 313 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 PRR7Q8TB68 274 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 HM13Q8TCT9 377 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 P3H4Q92791 437 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 N4BP2L2Q92802 583 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 PNPLA2Q96AD5 504 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SRMSQ9H3Y6 488 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 ASB8Q9H765 288 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 IMPACTQ9P2X3 320 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 RSPH14Q9UHP6 348 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 SERTAD3Q9UJW9 196 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 POMT2Q9UKY4 750 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 PADI2Q9Y2J8 665 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 HIVEP3Q5T1R4 2406 aa13.49□□□□□ -0.25
SEMA3F-208ENST00000470737 UNC79Q9P2D8 2635 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 PIKFYVEQ9Y2I7 2098 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 TCP11X1B4DZS4 312 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 CFAP99D6REC4 459 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 IFRD1O00458 451 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 DDX3YO15523 660 aaKnown RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 KLHL41O60662 606 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 HBQ1P09105 142 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 PECAM1P16284 738 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 CDKN2BP42772 138 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 ABRQ12979 859 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 MRPL49Q13405 166 aaKnown RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 KYNUQ16719 465 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 BCL7AQ4VC05 210 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 PRR30Q53SZ7 412 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 PRAMEF17Q5VTA0 474 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 SLC6A19Q695T7 634 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 HOOK3Q86VS8 718 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 CFAP206Q8IYR0 622 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 ZNF567Q8N184 647 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 GLIS1Q8NBF1 620 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 ACVR1CQ8NER5 493 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 LCN9Q8WX39 176 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 OXNAD1Q96HP4 312 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 RMDN2Q96LZ7 410 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 PPM1MQ96MI6 270 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 FERD3LQ96RJ6 166 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 C17orf62Q9BQA9 187 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 DPH2Q9BQC3 489 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 FERMT1Q9BQL6 677 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 NUDT9Q9BW91 350 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 PCMTD2Q9NV79 361 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 CRLS1Q9UJA2 301 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 TRHDEQ9UKU6 1024 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 CREBBPQ92793 2442 aa13.48□□□□□ -0.25
SEMA3F-208ENST00000470737 ENO4A6NNW6 628 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms