RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 RAPSNQ13702 412 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 LAMB3Q13751 1172 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 UAP1Q16222 522 aaPredicted RBP8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 SEL1L2Q5TEA6 688 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 LRRC66Q68CR7 880 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 C11orf63Q6NUN7 778 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 SPNS3Q6ZMD2 512 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 NOP9Q86U38 636 aaKnown RBP8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 TSPAN33Q86UF1 283 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 KCNMB4Q86W47 210 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 RHOT2Q8IXI1 618 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 UBL4BQ8N7F7 174 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 ENDOVQ8N8Q3 282 aaKnown RBP8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 CLEC1AQ8NC01 280 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 SLC20A1Q8WUM9 679 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 CXorf40BQ96DE9 158 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 SLC41A2Q96JW4 573 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 LRFN5Q96NI6 719 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 AGAP3Q96P47 875 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 C11orf70Q9BRQ4 267 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 TRIM51Q9BSJ1 452 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 SYT11Q9BT88 431 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 MLPHQ9BV36 600 aaPredicted RBP8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 CHST8Q9H2A9 424 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 NOD2Q9HC29 1040 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 ADAM22Q9P0K1 906 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 SEMA5BQ9P283 1151 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 CTTNBP2NLQ9P2B4 639 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
SYNGAP1-205ENST00000470232 CROCCQ5TZA2 2017 aa8.71□□□□□ -1.01
SYNGAP1-205ENST00000470232 IGHV5-51A0A0C4DH38 117 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 TTC24A2A3L6 582 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 SIGLEC16A6NMB1 481 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PDZK1P1A8MUH7 402 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 MIF4GDA9UHW6 222 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 MEN1O00255 615 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PEX12O00623 359 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CYP1A1P04798 512 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CD63P08962 238 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 BPIP17213 487 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 HPDP32754 393 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 LSP1P33241 339 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 MDH1P40925 334 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 NSFP46459 744 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF135P52742 658 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 GSCP56915 257 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 HSD11B2P80365 405 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 DR1Q01658 176 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 GUCY1A3Q02108 690 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 SLC10A7Q0GE19 358 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 DHX34Q14147 1143 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 MYBPC3Q14896 1274 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 INSCQ1MX18 579 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 VWA2Q5GFL6 755 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CRB2Q5IJ48 1285 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRIM72Q6ZMU5 477 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF517Q6ZMY9 492 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 FJX1Q86VR8 437 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PARP9Q8IXQ6 854 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZBTB2Q8N680 514 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 OR2W6PQ8NHA6 318 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CCHCR1Q8TD31 782 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF473Q8WTR7 871 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PIH1D2Q8WWB5 315 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CPT1BQ92523 772 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CLIP3Q96DZ5 547 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CD180Q99467 661 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 AGAP2Q99490 1192 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 CNPY3Q9BT09 278 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 TRIM31Q9BZY9 425 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 THAP2Q9H0W7 228 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 FAM83DQ9H4H8 585 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 FANCEQ9HB96 536 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 ZNF624Q9P2J8 865 aaPredicted RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 SUCOQ9UBS9 1254 aaKnown RBP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PADI2Q9Y2J8 665 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 PCNX1Q96RV3 2341 aa8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 NIPBLQ6KC79 2804 aaeCLIP8.71□□□□□ -1.02
SYNGAP1-205ENST00000470232 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 RGSL1A5PLK6 1076 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 MYO1FO00160 1098 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 KMOO15229 486 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 PHF2O75151 1096 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 STSP08842 583 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 EBLN1P0CF75 366 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ERCC2P18074 760 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 VCLP18206 1134 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 IDSP22304 550 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 CA4P22748 312 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 CES1P23141 567 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 SSTR2P30874 369 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 HADHAP40939 763 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 HALP42357 657 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 ARCN1P48444 511 aaKnown RBP8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 STC1P52823 247 aa8.7□□□□□ -1.02
SYNGAP1-205ENST00000470232 HADHBP55084 474 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms