RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 C4orf33Q8N1A6 199 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 PEX13Q92968 403 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 RBBP8Q99708 897 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 WDR26Q9H7D7 661 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 MAGEE1Q9HCI5 957 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 BPIFA1Q9NP55 256 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
LINC00173-201ENST00000470091 NSMCE4AQ9NXX6 385 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
LINC00173-201ENST00000470091 FKBPLQ9UIM3 349 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 PHTF1Q9UMS5 762 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 LOXL2Q9Y4K0 774 aa13.41□□□□□ -0.26
LINC00173-201ENST00000470091 C1orf232A0A0U1RR37 186 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 J3QKU1 62 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 TNFRSF10CO14798 259 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 STX7O15400 261 aaKnown RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 NOBOXO60393 691 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 SPAG7O75391 227 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 KRT38O76015 456 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 MT-ND3P03897 115 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 ITIH1P19827 911 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 PSMA3P25788 255 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 CNTFP26441 200 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 ALDH4A1P30038 563 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 TRIM23P36406 574 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 LIMK2P53671 638 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 MAPK10P53779 464 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 OR1D5P58170 312 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 CTBP1Q13363 440 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 C14orf28Q4W4Y0 310 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 PHF19Q5T6S3 580 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 GRTP1Q5TC63 336 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 AFTPHQ6ULP2 937 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 USP53Q70EK8 1073 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 C2CD4AQ8NCU7 369 aaPredicted RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 SNRNP27Q8WVK2 155 aaKnown RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 EID2BQ96D98 161 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 MCCC1Q96RQ3 725 aaPredicted RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 CARS2Q9HA77 564 aaKnown RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
LINC00173-201ENST00000470091 SENP1Q9P0U3 644 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 APPL1Q9UKG1 709 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
LINC00173-201ENST00000470091 A0A1W2PQ67 120 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PRSS38A1L453 326 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 GOLGA8RI6L899 631 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 B4GAT1O43505 415 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 CLDN7O95471 211 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 FUCA1P04066 466 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PRSS56P0CW18 603 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 BRAFP15056 766 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 LHCGRP22888 699 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 GABRB3P28472 473 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 CCKBRP32239 447 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 ETV5P41161 510 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 ETV3P41162 512 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 GNPDA1P46926 289 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 POLD2P49005 469 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 MAZP56270 477 aaKnown RBP13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PDE1BQ01064 536 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
LINC00173-201ENST00000470091 LGSNQ5TDP6 509 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 TMPRSS9Q7Z410 1059 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 HSD11B1LQ7Z5J1 315 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 SPRED1Q7Z699 444 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 LDB1Q86U70 411 aaPredicted RBP13.39□□□□□ -0.27
LINC00173-201ENST00000470091 ZFAND4Q86XD8 727 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 NDUFAF2Q8N183 169 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 CALML6Q8TD86 181 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 USP7Q93009 1102 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 NUS1Q96E22 293 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 MED8Q96G25 268 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 VPS39Q96JC1 886 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 COQ10AQ96MF6 247 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 SMC6Q96SB8 1091 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 MCMBPQ9BTE3 642 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 SEMA6CQ9H3T2 930 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 ZFYVE1Q9HBF4 777 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 RDH14Q9HBH5 336 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 KCNK9Q9NPC2 374 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PHPT1Q9NRX4 125 aaPredicted RBP13.39□□□□□ -0.27
LINC00173-201ENST00000470091 CATSPERZQ9NTU4 200 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 IL17CQ9P0M4 197 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 FBXO5Q9UKT4 447 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PPIL1Q9Y3C6 166 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PKP3Q9Y446 797 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 SPTA1P02549 2419 aa13.39□□□□□ -0.27
LINC00173-201ENST00000470091 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
LINC00173-201ENST00000470091 PRAMEF33A0A0G2JMD5 474 aa13.38□□□□□ -0.27
LINC00173-201ENST00000470091 TMEM120BA0PK00 339 aa13.38□□□□□ -0.27
LINC00173-201ENST00000470091 RHPN2P1A8MT19 583 aa13.38□□□□□ -0.27
LINC00173-201ENST00000470091 B8ZZF3 427 aa13.38□□□□□ -0.27
LINC00173-201ENST00000470091 PRAMEF10O60809 474 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms