RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 LMAN1P49257 510 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 SEPHS1P49903 392 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 SH3BP2P78314 561 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 MAP7Q14244 749 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 IL11RAQ14626 422 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 FAM92BQ6ZTR7 304 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 ZNF534Q76KX8 674 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 NLRP9Q7RTR0 991 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 TIPARPQ7Z3E1 657 aaKnown RBP13.71□□□□□ -0.21
COMMD3-208ENST00000470045 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 UBXN4Q92575 508 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 HDAC10Q969S8 669 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 SMARCAL1Q9NZC9 954 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 PRSS21Q9Y6M0 314 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 COLEC10Q9Y6Z7 277 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 IGHV5-51A0A0C4DH38 117 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 TLCD2A6NGC4 264 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 LIN7AO14910 233 aaPredicted RBP13.7□□□□□ -0.22
COMMD3-208ENST00000470045 STK17BO94768 372 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 FGF5P12034 268 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 PDHA2P29803 388 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 CDK16Q00536 496 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 PCID2Q5JVF3 399 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 CERS6Q6ZMG9 384 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 OOSP2Q86WS3 158 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 KMT5CQ86Y97 462 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 NLGN4XQ8N0W4 816 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 CARFQ8N187 725 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 ACVR1CQ8NER5 493 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 NLGN4YQ8NFZ3 816 aaPredicted RBP13.7□□□□□ -0.22
COMMD3-208ENST00000470045 OR4L1Q8NH43 312 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.7□□□□□ -0.22
COMMD3-208ENST00000470045 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 TREX1Q9NSU2 369 aa13.7□□□□□ -0.22
COMMD3-208ENST00000470045 TTC7AQ9ULT0 858 aaPredicted RBP13.7□□□□□ -0.22
COMMD3-208ENST00000470045 COL6A6A6NMZ7 2263 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 AP3B1O00203 1094 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 IFRD1O00458 451 aaPredicted RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 FTH1P02794 183 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 PRB1P04280 392 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 ITGB2P05107 769 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 LIFP15018 202 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 TPSB2P20231 275 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 MAP4P27816 1152 aaKnown RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 MAGEA6P43360 314 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 PREPP48147 710 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 FOXM1Q08050 763 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 ABHD18Q0P651 414 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 BOP1Q14137 746 aaKnown RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 SEMA3AQ14563 771 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 GSE1Q14687 1217 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 TPSAB1Q15661 275 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 TAF1BQ53T94 588 aaPredicted RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 GSTA5Q7RTV2 222 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 IL22RA1Q8N6P7 574 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 PPHLN1Q8NEY8 458 aaKnown RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 OR6C1Q96RD1 312 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 SLC12A9Q9BXP2 914 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 IL22Q9GZX6 179 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 TRIT1Q9H3H1 467 aaKnown RBP13.69□□□□□ -0.22
COMMD3-208ENST00000470045 MVB12BQ9H7P6 319 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 HRASLS2Q9NWW9 162 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 POMT2Q9UKY4 750 aa13.69□□□□□ -0.22
COMMD3-208ENST00000470045 SLC5A10A0PJK1 596 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 EIF4E1BA6NMX2 242 aaKnown RBP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 MATN2O00339 956 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 OR1I1O60431 355 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 ZNF28P17035 718 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 ACADLP28330 430 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 NPY2RP49146 381 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 KPNA2P52292 529 aaKnown RBP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 PRAMEP78395 509 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 TTC27Q6P3X3 843 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 CYB5D1Q6P9G0 228 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 ZNF449Q6P9G9 518 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 D2HGDHQ8N465 521 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 ZSCAN1Q8NBB4 408 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 TFGQ92734 400 aaPredicted RBP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 SLC45A3Q96JT2 553 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 PBKQ96KB5 322 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 TTC1Q99614 292 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 ULBP3Q9BZM4 244 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 TWSG1Q9GZX9 223 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 KCNF1Q9H3M0 494 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 TFB2MQ9H5Q4 396 aaKnown RBP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 MRM3Q9HC36 420 aaKnown RBP13.68□□□□□ -0.22
COMMD3-208ENST00000470045 CHRAC1Q9NRG0 131 aa13.68□□□□□ -0.22
COMMD3-208ENST00000470045 FASNP49327 2511 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms