RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 POLBP06746 335 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 PRSS56P0CW18 603 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 NDUFS1P28331 727 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 DLSTP36957 453 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 KPNA2P52292 529 aaKnown RBP15.88■□□□□ 0.13
COL9A3-208ENST00000469802 HSD11B2P80365 405 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 ACY1Q03154 408 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 POU6F1Q14863 301 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 OASLQ15646 514 aaKnown RBP15.88■□□□□ 0.13
COL9A3-208ENST00000469802 ATP1A1-AS1Q5TC04 95 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 PWWP2BQ6NUJ5 590 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 BPHLQ86WA6 291 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-208ENST00000469802 PIANPQ8IYJ0 282 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 CFAP206Q8IYR0 622 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 RNF10Q8N5U6 811 aaKnown RBP15.88■□□□□ 0.13
COL9A3-208ENST00000469802 CDKN2AIPNLQ96HQ2 116 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 POMT2Q9UKY4 750 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 BTRCQ9Y297 605 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 HEBP2Q9Y5Z4 205 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 COLEC10Q9Y6Z7 277 aa15.88■□□□□ 0.13
COL9A3-208ENST00000469802 OR6C74A6NCV1 312 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 ZBTB11O95625 1053 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-208ENST00000469802 MT-ND3P03897 115 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 TPH1P17752 444 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 TCN2P20062 427 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 CACNG1Q06432 222 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 DBN1Q16643 649 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 ZRANB3Q5FWF4 1079 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 ATG14Q6ZNE5 492 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 ACVR1CQ8NER5 493 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 STYXQ8WUJ0 223 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 ATG4AQ8WYN0 398 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 PPM1MQ96MI6 270 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 VPS37BQ9H9H4 285 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 LHX9Q9NQ69 397 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 FGF21Q9NSA1 209 aa15.87■□□□□ 0.13
COL9A3-208ENST00000469802 SPENQ96T58 3664 aaKnown RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 UBA6A0AVT1 1052 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 ERI2A8K979 691 aaKnown RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 MATN2O00339 956 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 PSMD3O43242 534 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 WISP1O95388 367 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 RECKO95980 971 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 GSTM1P09488 218 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 CD151P48509 253 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 TUBB4BP68371 445 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 GSTM4Q03013 218 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 RPA4Q13156 261 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 DNASE1L3Q13609 305 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 TUBB2AQ13885 445 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 SEPT6Q14141 434 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 GSE1Q14687 1217 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 DEFB109BQ30KR1 87 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 PACS1Q6VY07 963 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 LINC00523Q86TU6 105 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 CLDN19Q8N6F1 224 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 SPC24Q8NBT2 197 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 CT55Q8WUE5 264 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 APOBEC4Q8WW27 367 aaKnown RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 ZNF501Q96CX3 271 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 TUBB2BQ9BVA1 445 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 FRMD8P1Q9BZ68 369 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 LATS2Q9NRM7 1088 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 PIH1D1Q9NWS0 290 aaKnown RBP15.86■□□□□ 0.13
COL9A3-208ENST00000469802 KCND3Q9UK17 655 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 PADI1Q9ULC6 663 aa15.86■□□□□ 0.13
COL9A3-208ENST00000469802 C21orf140B9A014 251 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 LIASO43766 372 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 SUN1O94901 812 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 AP2A2O94973 939 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 FURINP09958 794 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 POLR2CP19387 275 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 PDHA2P29803 388 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 FOXN2P32314 431 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 ARCN1P48444 511 aaKnown RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 LAMB3Q13751 1172 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 BOP1Q14137 746 aaKnown RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 ITIH4Q14624 930 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 GPR19Q15760 415 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 C16orf46Q6P387 395 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 ZNF517Q6ZMY9 492 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 TAB3Q8N5C8 712 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 OR4E2Q8NGC2 313 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 OR13J1Q8NGT2 312 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 OR8K5Q8NH50 307 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 C9orf43Q8TAL5 461 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 UBE2Q2Q8WVN8 375 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 PITPNM3Q9BZ71 974 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 TRIM4Q9C037 500 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 TFB2MQ9H5Q4 396 aaKnown RBP15.85■□□□□ 0.13
COL9A3-208ENST00000469802 CLMPQ9H6B4 373 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 MVB12BQ9H7P6 319 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 C1GALT1Q9NS00 363 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 KCNMB2Q9Y691 235 aa15.85■□□□□ 0.13
COL9A3-208ENST00000469802 IFRD1O00458 451 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-208ENST00000469802 BTN3A1O00481 513 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 CPNE3O75131 537 aaKnown RBP15.84■□□□□ 0.13
COL9A3-208ENST00000469802 CREG1O75629 220 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 CCNYL3P0C7X3 344 aa15.84■□□□□ 0.13
COL9A3-208ENST00000469802 MSL3P1P0C860 447 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms