RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 KCTD11Q693B1 232 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 CYB5D1Q6P9G0 228 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 SNX20Q7Z614 316 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 TMTC1Q8IUR5 882 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 OR4E2Q8NGC2 313 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 HM13Q8TCT9 377 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 ULK4Q96C45 1275 aa23.84■■□□□ 1.41
PTCH1-210ENST00000468211 ZNF501Q96CX3 271 aaPredicted RBP23.84■■□□□ 1.41
PTCH1-210ENST00000468211 DNAJC1Q96KC8 554 aaKnown RBP23.84■■□□□ 1.41
PTCH1-210ENST00000468211 KLHL33A6NCF5 533 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 TJP3O95049 919 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 ZBTB11O95625 1053 aaPredicted RBP23.83■■□□□ 1.41
PTCH1-210ENST00000468211 ATP1B2P14415 290 aaPredicted RBP23.83■■□□□ 1.41
PTCH1-210ENST00000468211 ITGALP20701 1170 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 MC4RP32245 332 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 PRAMEF17Q5VTA0 474 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 SLC38A9Q8NBW4 561 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 COPS8Q99627 209 aa23.83■■□□□ 1.41
PTCH1-210ENST00000468211 IGLV3-16A0A075B6K0 115 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 A0A0U1RQJ8 604 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 C21orf140B9A014 251 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 METTL18O95568 372 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 RALBP11234 206 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 TPH1P17752 444 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 TUBB4BP68371 445 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 FOXK1P85037 733 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 PDE1BQ01064 536 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 LAMB3Q13751 1172 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 TUBB2AQ13885 445 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 ARMC6Q6NXE6 501 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 BPHLQ86WA6 291 aaPredicted RBP23.82■■□□□ 1.4
PTCH1-210ENST00000468211 MRFAP1L1Q96HT8 127 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 CALR3Q96L12 384 aaKnown RBP23.82■■□□□ 1.4
PTCH1-210ENST00000468211 TUBB2BQ9BVA1 445 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 RBSNQ9H1K0 784 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 OR52A5Q9H2C5 316 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 COG4Q9H9E3 785 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 ZDHHC3Q9NYG2 299 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 TLK1Q9UKI8 766 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 POMT2Q9UKY4 750 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 PACSIN2Q9UNF0 486 aaPredicted RBP23.82■■□□□ 1.4
PTCH1-210ENST00000468211 BTRCQ9Y297 605 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 COLEC10Q9Y6Z7 277 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 MAST4O15021 2626 aa23.82■■□□□ 1.4
PTCH1-210ENST00000468211 TRBV5-4A0A0C4DH59 114 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 SLC9B1P1A6NJY1 282 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 SCRG1O75711 98 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 DNAJB5O75953 348 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 RECKO95980 971 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 PDHA2P29803 388 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 HADHAP40939 763 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 VAV2P52735 878 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 PMS2P54278 862 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 GPS2Q13227 327 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 KRT33BQ14525 404 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 SERPINA9Q86WD7 417 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 CLDN19Q8N6F1 224 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 FAM71DQ8N9W8 422 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 PHC3Q8NDX5 983 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 FERD3LQ96RJ6 166 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 C19orf43Q9BQ61 176 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 CCM2Q9BSQ5 444 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 TLR10Q9BXR5 811 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 TRIM55Q9BYV6 548 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 KCND1Q9NSA2 647 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 PIH1D1Q9NWS0 290 aaKnown RBP23.81■■□□□ 1.4
PTCH1-210ENST00000468211 SOHLH2Q9NX45 425 aa23.81■■□□□ 1.4
PTCH1-210ENST00000468211 R3HDM2Q9Y2K5 976 aaKnown RBP23.81■■□□□ 1.4
PTCH1-210ENST00000468211 C17orf113A0A1B0GUU1 675 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 SEC16AO15027 2179 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 PDGFAP04085 211 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 NDUFS1P28331 727 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 PTPN4P29074 926 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 GDF10P55107 478 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 ZRANB3Q5FWF4 1079 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 LCN10Q6JVE6 187 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 TMEM126BQ8IUX1 230 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 PIANPQ8IYJ0 282 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 TAB3Q8N5C8 712 aaPredicted RBP23.8■■□□□ 1.4
PTCH1-210ENST00000468211 ACVR1CQ8NER5 493 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 NLE1Q9NVX2 485 aaPredicted RBP23.8■■□□□ 1.4
PTCH1-210ENST00000468211 FEZ2Q9UHY8 353 aaPredicted RBP23.8■■□□□ 1.4
PTCH1-210ENST00000468211 MAN2B2Q9Y2E5 1009 aa23.8■■□□□ 1.4
PTCH1-210ENST00000468211 TCRBV7S2A1N4TA0A589 114 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 CFAP99D6REC4 459 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 MKRN2OSH3BPM6 223 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 BTN3A3O00478 584 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 CPNE3O75131 537 aaKnown RBP23.79■■□□□ 1.4
PTCH1-210ENST00000468211 SNRNP200O75643 2136 aaKnown RBP23.79■■□□□ 1.4
PTCH1-210ENST00000468211 RFPL1O75677 317 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 IPO7O95373 1038 aaKnown RBP23.79■■□□□ 1.4
PTCH1-210ENST00000468211 ACRV1P26436 265 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 CETN2P41208 172 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 PREPP48147 710 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 ABRQ12979 859 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 IL10RAQ13651 578 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 PARP6Q2NL67 630 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 GPR33Q49SQ1 333 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 TCTN3Q6NUS6 607 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 ZNF517Q6ZMY9 492 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms