RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SEMA3GQ9NS98 782 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 MKS1Q9NXB0 559 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 ZDHHC2Q9UIJ5 367 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
BRAT1-203ENST00000467558 EDDM13A0A1B0GTR0 161 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 HNRNPCP07910 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 LEPRP48357 1165 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 ST13P50502 369 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 NEK2P51955 445 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 NR1H2P55055 460 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 SRSF11Q05519 484 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 STEAP4Q687X5 459 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 MMAAQ8IVH4 418 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 EEF1AKMT1Q8WVE0 214 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 SLC13A3Q8WWT9 602 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 GRIP2Q9C0E4 1043 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 FAM234BA2RU67 622 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 IFNA16P05015 189 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 GDI1P31150 447 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 ISLR2Q6UXK2 745 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 NACC2Q96BF6 587 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 TUBGCP5Q96RT8 1024 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 SLC32A1Q9H598 525 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 IL23AQ9NPF7 189 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 PRRC2BQ5JSZ5 2229 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 SEC13P55735 322 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 COPZ1P61923 177 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 PTPRCAPQ14761 206 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 FAM174BQ3ZCQ3 159 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 ZNF366Q8N895 744 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 RERGLQ9H628 205 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 CAPN8A6NHC0 703 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 PGLSO95336 258 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 MYL12AP19105 171 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 PTPN5P54829 565 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 USP46P62068 366 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 RAB30Q15771 203 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 MTX3Q5HYI7 312 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 C9orf64Q5T6V5 341 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 TYW3Q6IPR3 259 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 SCD5Q86SK9 330 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 PLD6Q8N2A8 252 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 ZMIZ2Q8NF64 920 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 MCCC1Q96RQ3 725 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 RANBP9Q96S59 729 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 CIB1Q99828 191 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
BRAT1-203ENST00000467558 AKTIPQ9H8T0 292 aa13.57□□□□□ -0.24
BRAT1-203ENST00000467558 FAM47E-STBD1D6RA91 191 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 NBNO60934 754 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 MTX2O75431 263 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 RHOP08100 348 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 AOC1P19801 751 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 CMPK1P30085 196 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 MAPK12P53778 367 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 ATP13A5Q4VNC0 1218 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 C2orf27AQ580R0 203 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 FBXO46Q6PJ61 603 aaPredicted RBP13.56□□□□□ -0.24
BRAT1-203ENST00000467558 NAPRTQ6XQN6 538 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 TP53INP2Q8IXH6 220 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 SCML4Q8N228 414 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 DEPDC4Q8N2C3 294 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 DNAJB8Q8NHS0 232 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 CSNK1G1Q9HCP0 422 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 C2orf78A6NCI8 922 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 ADAMTS4O75173 837 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 SCELO95171 688 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 HNRNPA1P09651 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
BRAT1-203ENST00000467558 ACTR3P61158 418 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 SWT1Q5T5J6 900 aaKnown RBP13.56□□□□□ -0.24
BRAT1-203ENST00000467558 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 ALKAL1Q6UXT8 129 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 CYP2U1Q7Z449 544 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 BPIFB6Q8NFQ5 453 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 LCN9Q8WX39 176 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 PYCR2Q96C36 320 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 EFCAB11Q9BUY7 163 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 B4GALT6Q9UBX8 382 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 SLC7A8Q9UHI5 535 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 MRPS17Q9Y2R5 130 aaKnown RBP13.56□□□□□ -0.24
BRAT1-203ENST00000467558 LAMB1P07942 1786 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 MATN2O00339 956 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 RB1P06400 928 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 MAT2AP31153 395 aaKnown RBP13.56□□□□□ -0.24
BRAT1-203ENST00000467558 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
BRAT1-203ENST00000467558 HEPACAMQ14CZ8 416 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 BROXQ5VW32 411 aa13.56□□□□□ -0.24
BRAT1-203ENST00000467558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms