RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 TAS1R2Q8TE23 839 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 LGALS12Q96DT0 336 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 TRAF4Q9BUZ4 470 aaPredicted RBP3.84□□□□□ -1.79
SMC4-207ENST00000467263 RBM4Q9BWF3 364 aaKnown RBP3.84□□□□□ -1.79
SMC4-207ENST00000467263 GFRA4Q9GZZ7 299 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 OLFML3Q9NRN5 406 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 RHCGQ9UBD6 479 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 HACL1Q9UJ83 578 aa3.84□□□□□ -1.79
SMC4-207ENST00000467263 PTRH2Q9Y3E5 179 aaKnown RBP3.84□□□□□ -1.79
SMC4-207ENST00000467263 RSF1Q96T23 1441 aaPredicted RBP3.84□□□□□ -1.79
SMC4-207ENST00000467263 hCG_1807616A0A1W2PRN6 198 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 ELOVL7A1L3X0 281 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 ANTXRLA6NF34 631 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 MAGEB17A8MXT2 336 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 HHLA1C9JL84 531 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 TBX6O95947 436 aaPredicted RBP3.83□□□□□ -1.8
SMC4-207ENST00000467263 ALDH4A1P30038 563 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 NRIP1P48552 1158 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 PNLIPRP2P54317 469 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 SNX16P57768 344 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 PSMC6P62333 389 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 GNB1P62873 340 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 CXCL9Q07325 125 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 PLEKHS1Q5SXH7 462 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 CORO6Q6QEF8 472 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 MFSD6Q6ZSS7 791 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 HAUS6Q7Z4H7 955 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 LDB1Q86U70 411 aaPredicted RBP3.83□□□□□ -1.8
SMC4-207ENST00000467263 KBTBD6Q86V97 674 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 PLD3Q8IV08 490 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 FAM114A1Q8IWE2 563 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 RPAP2Q8IXW5 612 aaPredicted RBP3.83□□□□□ -1.8
SMC4-207ENST00000467263 DNAJC22Q8N4W6 341 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 POC5Q8NA72 575 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 CTCFLQ8NI51 663 aaPredicted RBP3.83□□□□□ -1.8
SMC4-207ENST00000467263 MTERF3Q96E29 417 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 SLC47A1Q96FL8 570 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 CCDC34Q96HJ3 373 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 C16orf70Q9BSU1 422 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 ABHD6Q9BV23 337 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 EGLN1Q9GZT9 426 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 MAF1Q9H063 256 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 SIX2Q9NPC8 291 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 ECHDC1Q9NTX5 307 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 WSB2Q9NYS7 404 aaPredicted RBP3.83□□□□□ -1.8
SMC4-207ENST00000467263 ZNF148Q9UQR1 794 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 KCNK7Q9Y2U2 307 aa3.83□□□□□ -1.8
SMC4-207ENST00000467263 ASTN2O75129 1339 aaPredicted RBP3.82□□□□□ -1.8
SMC4-207ENST00000467263 ANKRD18BA2A2Z9 1011 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 SSX4O60224 188 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 CREG1O75629 220 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 CSH1P0DML2 217 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 CSH2P0DML3 217 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 LIFP15018 202 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 ALOX12P18054 663 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 EIF5P55010 431 aaKnown RBP3.82□□□□□ -1.8
SMC4-207ENST00000467263 CHAF1BQ13112 559 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 WTAPQ15007 396 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 IGSF11Q5DX21 431 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 RILPL1Q5EBL4 403 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 HYIQ5T013 277 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 TMCO3Q6UWJ1 677 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 SH2D5Q6ZV89 423 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 FBXO39Q8N4B4 442 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 ZNF248Q8NDW4 579 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 TMEM143Q96AN5 459 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 CALML4Q96GE6 196 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 OR6C1Q96RD1 312 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 MYADMQ96S97 322 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 BARHL1Q9BZE3 327 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 SPATC1LQ9H0A9 340 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 KCNK15Q9H427 330 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 ACKR4Q9NPB9 350 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 INTS10Q9NVR2 710 aaKnown RBP3.82□□□□□ -1.8
SMC4-207ENST00000467263 OSER1Q9NX31 292 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 SLC7A7Q9UM01 511 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 KCNJ14Q9UNX9 436 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 GPR34Q9UPC5 381 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 RABGAP1Q9Y3P9 1069 aa3.82□□□□□ -1.8
SMC4-207ENST00000467263 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.82□□□□□ -1.84e-11■■□□□ 13
SMC4-207ENST00000467263 MED19A0JLT2 244 aaPredicted RBP3.81□□□□□ -1.8
SMC4-207ENST00000467263 AVILO75366 819 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 CSPG5O95196 566 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 NGFP01138 241 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 VPREB1P12018 145 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 GNB3P16520 340 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 GABRA5P31644 462 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 ACSL1P33121 698 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 CLNS1AP54105 237 aaKnown RBP3.81□□□□□ -1.8
SMC4-207ENST00000467263 PNRC1Q12796 327 aaPredicted RBP3.81□□□□□ -1.8
SMC4-207ENST00000467263 PPIGQ13427 754 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC4-207ENST00000467263 MAPRE1Q15691 268 aaKnown RBP3.81□□□□□ -1.8
SMC4-207ENST00000467263 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 ISCA2Q86U28 154 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 LINC00346Q8IVM7 164 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 TAGAPQ8N103 731 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 WDSUB1Q8N9V3 476 aa3.81□□□□□ -1.8
SMC4-207ENST00000467263 NSUN4Q96CB9 384 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms