RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	SLC7A7	Q9UM01	511 aa		5.07	□□□□□ -1.6
CCNL1-209	ENST00000467081	RPS6KL1	Q9Y6S9	549 aa		5.07	□□□□□ -1.6
CCNL1-209	ENST00000467081	STK36	Q9NRP7	1315 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	PRSS51	A0A1B0GVH4	220 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	TIMM44	O43615	452 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	DOK2	O60496	412 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	ZNF883	P0CG24	379 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	RNF224	P0DH78	156 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	PSMB10	P40306	273 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	VEGFC	P49767	419 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	TMF1	P82094	1093 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	AIMP2	Q13155	320 aa	Known RBP	5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	PRKG2	Q13237	762 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	FCN2	Q15485	313 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	FAM205BP	Q63HN1	556 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	INTS8	Q75QN2	995 aa	Known RBP	5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	ISCA2	Q86U28	154 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	ZNF843	Q8N446	348 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	WDR20	Q8TBZ3	569 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	LRRC59	Q96AG4	307 aa	Known RBP	5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	TIGD1	Q96MW7	591 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	ABHD6	Q9BV23	337 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	GFRA4	Q9GZZ7	299 aa		5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	ZNF215	Q9UL58	517 aa	Predicted RBP	5.06	□□□□□ -1.6
CCNL1-209	ENST00000467081	ELOVL7	A1L3X0	281 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081		B4DLN1	442 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	NR5A2	O00482	541 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	T	O15178	435 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	PLA2G4B	P0C869	781 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	MRPL12	P52815	198 aa	Known RBP	5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	MELK	Q14680	651 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	RAB41	Q5JT25	222 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	CORO6	Q6QEF8	472 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	C16orf54	Q6UWD8	224 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	AACS	Q86V21	672 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	ERLEC1	Q96DZ1	483 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	MTERF3	Q96E29	417 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	TRAF4	Q9BUZ4	470 aa	Predicted RBP	5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	MAK16	Q9BXY0	300 aa	Known RBP	5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	RTN4R	Q9BZR6	473 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	GPR34	Q9UPC5	381 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	SNED1	Q8TER0	1413 aa		5.05	□□□□□ -1.6
CCNL1-209	ENST00000467081	MED19	A0JLT2	244 aa	Predicted RBP	5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	LNP1	A1A4G5	178 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	PSMD14	O00487	310 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	NGF	P01138	241 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	IGLV1-44	P01699	117 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	ITGA3	P26006	1051 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	SLC15A1	P46059	708 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	NAP1L1	P55209	391 aa	Known RBP	5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	MC1R	Q01726	317 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	FFAR4	Q5NUL3	377 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	HCAR2	Q8TDS4	363 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	CCDC34	Q96HJ3	373 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	PPIL3	Q9H2H8	161 aa	Known RBP	5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	HAUS2	Q9NVX0	235 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	SEC63	Q9UGP8	760 aa	Known RBP	5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	HACL1	Q9UJ83	578 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	PLAGL1	Q9UM63	463 aa		5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.04	□□□□□ -1.6
CCNL1-209	ENST00000467081	IGKV3D-15	A0A087WSY6	115 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081		K7ENM7	598 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	DNM1L	O00429	736 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	TCERG1	O14776	1098 aa	Known RBP	5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	AHCYL1	O43865	530 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	SSX4	O60224	188 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	CLPTM1	O96005	669 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	KCNJ10	P78508	379 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	NUCB1	Q02818	461 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	GTDC1	Q4AE62	458 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	ARHGEF16	Q5VV41	709 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	SPATA1	Q5VX52	437 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	KRTAP7-1	Q8IUC3	87 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	ZFAND2B	Q8WV99	257 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	FAM120B	Q96EK7	910 aa	Known RBP	5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	WBP1	Q96G27	269 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	MYADM	Q96S97	322 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	RTP3	Q9BQQ7	232 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	NUDT16L1	Q9BRJ7	211 aa	Known RBP	5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	ARHGEF38	Q9NXL2	777 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	CLIC5	Q9NZA1	410 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	LARS	Q9P2J5	1176 aa	Known RBP	5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	SUCLA2	Q9P2R7	463 aa	Predicted RBP	5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	RHCG	Q9UBD6	479 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	TBC1D29	Q9UFV1	150 aa		5.03	□□□□□ -1.6
CCNL1-209	ENST00000467081	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.03	□□□□□ -1.6	1e-9	■■■□□ 17.9
CCNL1-209	ENST00000467081	ASTN2	O75129	1339 aa	Predicted RBP	5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081		A0A1W2PQ09	198 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	AGAP14	A8MT82	685 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	CTDSP2	O14595	271 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	ZWINT	O95229	277 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	FRMD6-AS1	P0C7T7	363 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	CEACAM1	P13688	526 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	ZNF26	P17031	533 aa	Predicted RBP	5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	GCH1	P30793	250 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	CEACAM8	P31997	349 aa	Predicted RBP	5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	CLNS1A	P54105	237 aa	Known RBP	5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	CREB5	Q02930	508 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	CXCL9	Q07325	125 aa		5.02	□□□□□ -1.61
CCNL1-209	ENST00000467081	PNRC1	Q12796	327 aa	Predicted RBP	5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms