RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MT-ND3P03897 115 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PYGLP06737 847 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 GSTA1P08263 222 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ITGA2BP08514 1039 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ERVK-10P10266 1014 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 BPIP17213 487 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 RPS3P23396 243 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS41-211ENST00000466017 GKP32189 559 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SPAM1P38567 509 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PTGER3P43115 390 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CD151P48509 253 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 TTPAP49638 278 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CLCN5P51795 746 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 NEK3P51956 506 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 COPAP53621 1224 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 RPS14P62263 151 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 FAM193AP78312 1265 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 KDSRQ06136 332 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CACNG1Q06432 222 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 DPTQ07507 201 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 RALGDSQ12967 914 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 MTM1Q13496 603 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 LRRC32Q14392 662 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ITIH4Q14624 930 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 STARD3Q14849 445 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PON2Q15165 354 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CST6Q15828 149 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CRY1Q16526 586 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 FASTKD1Q53R41 847 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 C2orf27AQ580R0 203 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 RNF187Q5TA31 235 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 ZNF776Q68DI1 518 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 NAIF1Q69YI7 327 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 ERAP2Q6P179 960 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 LIPIQ6XZB0 460 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 KDM7AQ6ZMT4 941 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PARS2Q7L3T8 475 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 STK32CQ86UX6 486 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 KBTBD6Q86V97 674 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CTAGE3PQ8IX95 158 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 UNC5BQ8IZJ1 945 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS41-211ENST00000466017 TRAM1L1Q8N609 369 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 BANPQ8N9N5 519 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 IL17RCQ8NAC3 791 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 OR13C4Q8NGS5 318 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 OR6K2Q8NGY2 324 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 MAFAQ8NHW3 353 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 TTC8Q8TAM2 541 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ZNF398Q8TD17 642 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 DENND1AQ8TEH3 1009 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PDCD6IPQ8WUM4 868 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS41-211ENST00000466017 CLDN23Q96B33 292 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ARRDC3Q96B67 414 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ULK4Q96C45 1275 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 DNAJC1Q96KC8 554 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 VPS35Q96QK1 796 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ACOX2Q99424 681 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 FAM126AQ9BYI3 521 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 EPHX3Q9H6B9 360 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ZDHHC6Q9H6R6 413 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 POPDC3Q9HBV1 291 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PCDH12Q9NPG4 1184 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 IL26Q9NPH9 171 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 DYRK4Q9NR20 520 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 IARS2Q9NSE4 1012 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 CATSPERZQ9NTU4 200 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SMOXQ9NWM0 555 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 THEGQ9P2T0 379 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 B4GALT6Q9UBX8 382 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SLC2A6Q9UGQ3 507 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 DCDC2Q9UHG0 476 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PFDN2Q9UHV9 154 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SARDHQ9UL12 918 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 GRID1Q9ULK0 1009 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 MMP17Q9ULZ9 603 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 WASF3Q9UPY6 502 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 VWA7Q9Y334 891 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 PCDHB1Q9Y5F3 818 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 FADS3Q9Y5Q0 445 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 NPFFR2Q9Y5X5 522 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 ARL5AQ9Y689 179 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SLC30A1Q9Y6M5 507 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 COL4A3Q01955 1670 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 IGLV3-16A0A075B6K0 115 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 A0A1W2PPM1 405 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 KANSL1LA0AUZ9 987 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 NPIPB15A6NHN6 443 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 F8W8V4 182 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 H3BMM5 538 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 KPNA3O00505 521 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 GAPDHSO14556 408 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 TM9SF1O15321 606 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 NARSO43776 548 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 TYROBPO43914 113 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 NDUFS3O75489 264 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 SRP72O76094 671 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 HAUS5O94927 633 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 WISP3O95389 354 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms