RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ACTN1P12814 892 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 GRAPQ13588 217 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 RAPSNQ13702 412 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 TAF13Q15543 124 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 DCAF10Q5QP82 559 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 ADALQ6DHV7 355 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 CERS3Q8IU89 383 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
SMC4-205ENST00000465563 CPXCR1Q8N123 301 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 OR1J1Q8NGS3 322 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 DAZLQ92904 295 aaKnown RBP4.29□□□□□ -1.72
SMC4-205ENST00000465563 OMA1Q96E52 524 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 GPATCH1Q9BRR8 931 aaKnown RBP4.29□□□□□ -1.72
SMC4-205ENST00000465563 SLA2Q9H6Q3 261 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 PREBQ9HCU5 417 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 ERAP1Q9NZ08 941 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 AGRNO00468 2067 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 KLF11O14901 512 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 SCAMP1O15126 338 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 KHDRBS3O75525 346 aaKnown RBP4.28□□□□□ -1.72
SMC4-205ENST00000465563 TMEM11P17152 192 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 EFNA1P20827 205 aaPredicted RBP4.28□□□□□ -1.72
SMC4-205ENST00000465563 UGT1A4P22310 534 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 RGS2P41220 211 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 HNF4AP41235 474 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 C2CD6Q53TS8 623 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 GCNT6Q5T4J0 391 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 HJURPQ8NCD3 748 aaPredicted RBP4.28□□□□□ -1.72
SMC4-205ENST00000465563 SGK494Q96LW2 274 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 ZNF582Q96NG8 517 aaPredicted RBP4.28□□□□□ -1.72
SMC4-205ENST00000465563 SLC22A12Q96S37 553 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 TRAF4Q9BUZ4 470 aaPredicted RBP4.28□□□□□ -1.72
SMC4-205ENST00000465563 KAT14Q9H8E8 782 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 PDP2Q9P2J9 529 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 CRYL1Q9Y2S2 319 aa4.28□□□□□ -1.72
SMC4-205ENST00000465563 A0A1W2PRB8 838 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 ELOVL7A1L3X0 281 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 A6NLC8 198 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 KPNA7A9QM74 516 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 CASP6P55212 293 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 MS4A2Q01362 244 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 PCGF3Q3KNV8 242 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 ZSCAN23Q3MJ62 389 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 TAF1BQ53T94 588 aaPredicted RBP4.27□□□□□ -1.73
SMC4-205ENST00000465563 PIGZQ86VD9 579 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 FUCA2Q9BTY2 467 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 HGH1Q9BTY7 390 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 LRRC61Q9BV99 259 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 PITPNM3Q9BZ71 974 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 TAB2Q9NYJ8 693 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 EHD2Q9NZN4 543 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 MTMR6Q9Y217 621 aa4.27□□□□□ -1.73
SMC4-205ENST00000465563 SPIN1Q9Y657 262 aaPredicted RBP4.27□□□□□ -1.73
SMC4-205ENST00000465563 PRKRAO75569 313 aaKnown RBP4.26□□□□□ -1.73
SMC4-205ENST00000465563 NXPH2O95156 264 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 EIF2S1P05198 315 aaKnown RBP4.26□□□□□ -1.73
SMC4-205ENST00000465563 DRP2Q13474 957 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 EIF4A2Q14240 407 aaKnown RBP4.26□□□□□ -1.73
SMC4-205ENST00000465563 NECTIN1Q15223 517 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 IL27RAQ6UWB1 636 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 FBXL16Q8N461 479 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 DCLK2Q8N568 766 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 LINC00612Q8N6U2 182 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 KBTBD8Q8NFY9 601 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 OR2L2Q8NH16 312 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 OR4C3Q8NH37 302 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 DYRK2Q92630 601 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 ARHGEF2Q92974 986 aaKnown RBP4.26□□□□□ -1.73
SMC4-205ENST00000465563 MOAP1Q96BY2 351 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 C1orf74Q96LT6 269 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 NSMCE3Q96MG7 304 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 UPF3AQ9H1J1 476 aaKnown RBP4.26□□□□□ -1.73
SMC4-205ENST00000465563 JMJD4Q9H9V9 463 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 PNMA2Q9UL42 364 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMC4-205ENST00000465563 ADAMTS9Q9P2N4 1935 aa4.26□□□□□ -1.73
SMC4-205ENST00000465563 A0A1W2PN81 502 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 A8MU10 97 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 NDUFS4O43181 175 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 CCNDBP1O95273 360 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 GH2P01242 217 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 DNAH10OSP0CZ25 163 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 CHRNA7P36544 502 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 PTGER3P43115 390 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 GSDMDP57764 484 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 PRKCZQ05513 592 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 PLA2G7Q13093 441 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 HLA-BQ31612 363 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 TMEM95Q3KNT9 176 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 RARS2Q5T160 578 aaKnown RBP4.25□□□□□ -1.73
SMC4-205ENST00000465563 WLSQ5T9L3 541 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 TMEM198Q66K66 360 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 MARVELD2Q8N4S9 558 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 CPSF7Q8N684 471 aaKnown RBP4.25□□□□□ -1.73
SMC4-205ENST00000465563 OLIG1Q8TAK6 271 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 ZNF414Q96IQ9 312 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 GAD1Q99259 594 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 KRT12Q99456 494 aa4.25□□□□□ -1.73
SMC4-205ENST00000465563 DDOQ99489 341 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms