RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SYTL3Q4VX76 610 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 CTSL3PQ5NE16 218 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 ZDHHC24Q6UX98 284 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 LKAAEAR1Q8TD35 194 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 ZFPM2Q8WW38 1151 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 ASZ1Q8WWH4 475 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 TMEM159Q96B96 161 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 GRAMD1AQ96CP6 724 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 CERS2Q96G23 380 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 RMDN2Q96LZ7 410 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 EPB41L1Q9H4G0 881 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 RDH14Q9HBH5 336 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 SAYSD1Q9NPB0 183 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 FBXO6Q9NRD1 293 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 HEBP2Q9Y5Z4 205 aa14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 COL27A1Q8IZC6 1860 aaPredicted RBP14.18□□□□□ -0.14
SQSTM1-205ENST00000464493 LILRA5A6NI73 299 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 TMX2-CTNND1H3BSU7 103 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 KPNA5O15131 536 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 DUX1O43812 170 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 GPC4O75487 556 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 HAUS5O94927 633 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 APOA4P06727 396 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 F7P08709 466 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 PKMP14618 531 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 CHRM3P20309 590 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 AOAHP28039 575 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 MAPK9P45984 424 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 CARSP49589 748 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 CSE1LP55060 971 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 INHBCP55103 352 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 HSPA14Q0VDF9 509 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 CAMK2BQ13554 666 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 KRT33BQ14525 404 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 MAP9Q49MG5 647 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 OTOAQ7RTW8 1153 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 TMPRSS9Q7Z410 1059 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 PDZD3Q86UT5 571 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 CNTN4Q8IWV2 1026 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 PALM2Q8IXS6 379 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 C2CD4AQ8NCU7 369 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 TFGQ92734 400 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 TMEM74Q96NL1 305 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 FERD3LQ96RJ6 166 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 DPYSL5Q9BPU6 564 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 NUDT22Q9BRQ3 303 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 FOXP3Q9BZS1 431 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 FAM114A2Q9NRY5 505 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 DMGDHQ9UI17 866 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 ENTPD2Q9Y5L3 495 aa14.17□□□□□ -0.14
SQSTM1-205ENST00000464493 WDFY3Q8IZQ1 3526 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 TRABD2BA6NFA1 517 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 BHMG1C9JSJ3 638 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 NIPSNAP2O75323 286 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 UBXN7O94888 489 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 HOXB3P14651 431 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 AMD1P17707 334 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 ACADLP28330 430 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 NDUFS1P28331 727 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 LEPRP48357 1165 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 PDX1P52945 283 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 MPP1Q00013 466 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 CFHR1Q03591 330 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 ZFP36L1Q07352 338 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 TMED2Q15363 201 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 TEDDM1Q5T9Z0 273 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 DUS1LQ6P1R4 473 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 TMEM71Q6P5X7 295 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 TRMT10BQ6PF06 316 aaKnown RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 WDR74Q6RFH5 385 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 ZNF574Q6ZN55 896 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 KIAA0408Q6ZU52 694 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 B3GNT8Q7Z7M8 397 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 CCDC25Q86WR0 208 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 SLC22A15Q8IZD6 547 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 PHC3Q8NDX5 983 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 GSDMBQ8TAX9 411 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 NCSTNQ92542 709 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 PHACTR1Q9C0D0 580 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 ZDHHC18Q9NUE0 388 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 MOCS1Q9NZB8 636 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 CDYLQ9Y232 598 aa14.16□□□□□ -0.14
SQSTM1-205ENST00000464493 E5RI56 91 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 ZNF500O60304 480 aaPredicted RBP14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 SLCO2B1O94956 709 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 PROS1P07225 676 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 TYRP1P17643 537 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 CCKBRP32239 447 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 CSF2RBP32927 897 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 MAGEA4P43358 317 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 LIMK2P53671 638 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 PLCL1Q15111 1095 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 DNTTIP2Q5QJE6 756 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 PLEKHS1Q5SXH7 462 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 ZNF549Q6P9A3 640 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 CNSTQ6PJW8 725 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 VRK3Q8IV63 474 aa14.15□□□□□ -0.14
SQSTM1-205ENST00000464493 SLITRK4Q8IW52 837 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms