RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SPECC1Q5M775 1068 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 ARMC4Q5T2S8 1044 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 GCNT6Q5T4J0 391 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 OR7E24Q6IFN5 339 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 GDPD4Q6W3E5 623 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 RBPMS2Q6ZRY4 209 aaKnown RBP3.94□□□□□ -1.78
CLK1-208ENST00000464454 CUZD1Q86UP6 607 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 IQCHQ86VS3 1027 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 TMEM173Q86WV6 379 aaPredicted RBP3.94□□□□□ -1.78
CLK1-208ENST00000464454 GBGT1Q8N5D6 347 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 ZBTB8BQ8NAP8 495 aaPredicted RBP3.94□□□□□ -1.78
CLK1-208ENST00000464454 OR6J1Q8NGC5 347 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 BBS10Q8TAM1 723 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 SECISBP2LQ93073 1101 aaKnown RBP3.94□□□□□ -1.78
CLK1-208ENST00000464454 VPS33AQ96AX1 596 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 HDAC11Q96DB2 347 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 INPP4AQ96PE3 977 aaPredicted RBP3.94□□□□□ -1.78
CLK1-208ENST00000464454 LRRC1Q9BTT6 524 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 VPS33BQ9H267 617 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 OPA3Q9H6K4 179 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 TCF7L2Q9NQB0 619 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 STK26Q9P289 416 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 RALYQ9UKM9 306 aaKnown RBP3.94□□□□□ -1.78
CLK1-208ENST00000464454 DLGAP4Q9Y2H0 992 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 SCN5AQ14524 2016 aa3.94□□□□□ -1.78
CLK1-208ENST00000464454 A0A0B4J293 547 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 HEPACAM2A8MVW5 462 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 C16orf97H3BN30 126 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 TMEM178BH3BS89 294 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 EIF3DO15371 548 aaKnown RBP eCLIP3.93□□□□□ -1.78
CLK1-208ENST00000464454 MED24O75448 989 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 LDLRP01130 860 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 ATP1A1P05023 1023 aaKnown RBP3.93□□□□□ -1.78
CLK1-208ENST00000464454 FYNP06241 537 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 QDPRP09417 244 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 ITGA2P17301 1181 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 ERCC2P18074 760 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 MT3P25713 68 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 MC5RP33032 325 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 ARCN1P48444 511 aaKnown RBP3.93□□□□□ -1.78
CLK1-208ENST00000464454 FMO5P49326 533 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 HOXA1P49639 335 aaPredicted RBP3.93□□□□□ -1.78
CLK1-208ENST00000464454 RAB28P51157 221 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 ZNF75DP51815 510 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 MLLT10P55197 1068 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 RUNX1T1Q06455 604 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 RALGDSQ12967 914 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 HSPB3Q12988 150 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 VSIG1Q86XK7 387 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 MOSPD2Q8NHP6 518 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 SMPDL3BQ92485 455 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 SEMA4DQ92854 862 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 NXNL1Q96CM4 212 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 MTERF3Q96E29 417 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 DOCK7Q96N67 2140 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 C16orf70Q9BSU1 422 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 CSTL1Q9H114 145 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 WNT5BQ9H1J7 359 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 NOL11Q9H8H0 719 aaKnown RBP3.93□□□□□ -1.78
CLK1-208ENST00000464454 ANKZF1Q9H8Y5 726 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 EQTNQ9NQ60 294 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 NPAP1Q9NZP6 1156 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 SLC24A2Q9UI40 661 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 NME7Q9Y5B8 376 aa3.93□□□□□ -1.78
CLK1-208ENST00000464454 FAM172BPA6NC97 362 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 ANKUB1A6NFN9 424 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 XRCC3O43542 346 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 KRT86O43790 486 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 GPR137BO60478 399 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 TBCAO75347 108 aaKnown RBP3.92□□□□□ -1.78
CLK1-208ENST00000464454 WISP2O76076 250 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 PCGF2P35227 344 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 AHRP35869 848 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 ZNF41P51814 821 aaPredicted RBP3.92□□□□□ -1.78
CLK1-208ENST00000464454 GAGE5Q13069 117 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 GAGE6Q13070 117 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 KRT81Q14533 505 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 COG2Q14746 738 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 PTPRCAPQ14761 206 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 TNIP1Q15025 636 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 PDSS1Q5T2R2 415 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 RNASEH2BQ5TBB1 312 aaKnown RBP3.92□□□□□ -1.78
CLK1-208ENST00000464454 ARMC3Q5W041 872 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 KLC3Q6P597 504 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 FAM171BQ6P995 826 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 FAM198BQ6UWH4 519 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 RAD9BQ6WBX8 426 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 SLFN11Q7Z7L1 901 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 SLC9B2Q86UD5 537 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 XXYLT1Q8NBI6 393 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 OR2AJ1Q8NGZ0 328 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 ATL1Q8WXF7 558 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 DNASE2BQ8WZ79 361 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 SLAMF9Q96A28 289 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 ABHD8Q96I13 439 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 ZNF582Q96NG8 517 aaPredicted RBP3.92□□□□□ -1.78
CLK1-208ENST00000464454 UHRF2Q96PU4 802 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 OLFM1Q99784 485 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 NUP85Q9BW27 656 aa3.92□□□□□ -1.78
CLK1-208ENST00000464454 ANKRD2Q9GZV1 360 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms