RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MAD1L1Q9Y6D9 718 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 TEX264Q9Y6I9 313 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 DMXL2Q8TDJ6 3036 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 LILRA5A6NI73 299 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 A8MU76 341 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 PLD2O14939 933 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 TNFSF15O95150 251 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 OR56A5P0C7T3 313 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 MTHFD1P11586 935 aaKnown RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 AMD1P17707 334 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 ITGB6P18564 788 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 PGAM1P18669 254 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 PAMP19021 973 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 RBMS1P29558 406 aaKnown RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 PPARGP37231 505 aaPredicted RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 PREPP48147 710 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 LIMK2P53671 638 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 PDIA2Q13087 525 aaKnown RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 BRD3Q15059 726 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 ANKRD20A4Q4UJ75 823 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 ZNF658BQ4V348 819 aaPredicted RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 AARS2Q5JTZ9 985 aaKnown RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 CAPRIN2Q6IMN6 1127 aaKnown RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 TMEM71Q6P5X7 295 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 NAPRTQ6XQN6 538 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 CEP128Q6ZU80 1094 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 EIF1ADQ8N9N8 165 aaKnown RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 IFT81Q8WYA0 676 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 ELMO1Q92556 727 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 FCRL3Q96P31 734 aaPredicted RBP16.65■□□□□ 0.26
VPS52-215ENST00000464425 KLHL3Q9UH77 587 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 LOXL2Q9Y4K0 774 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 RPS6KL1Q9Y6S9 549 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 FAM169AQ9Y6X4 670 aa16.65■□□□□ 0.26
VPS52-215ENST00000464425 CELSR3Q9NYQ7 3312 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 ZCWPW2A0A1B0GU75 182 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 SRRM3A6NNA2 597 aaPredicted RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 UBXN7O94888 489 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 FTH1P02794 183 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 PDHA2P29803 388 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 ELK3P41970 407 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 TTPAP49638 278 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 EIF3IQ13347 325 aaKnown RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 KRT33BQ14525 404 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 C16orf72Q14CZ0 275 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 TBC1D25Q3MII6 688 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 TEX35Q5T0J7 233 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 KIAA0930Q6ICG6 404 aaPredicted RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 WDR74Q6RFH5 385 aaPredicted RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 IGDCC3Q8IVU1 814 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 RBM12BQ8IXT5 1001 aaKnown RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 LSMEM2Q8N112 164 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 ZNF669Q96BR6 464 aaPredicted RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 SLC46A1Q96NT5 459 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 CMKLR1Q99788 373 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 DPYSL5Q9BPU6 564 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 IL1RAPL1Q9NZN1 696 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 PISDQ9UG56 409 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 MTRF1LQ9UGC7 380 aaKnown RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 PCDHGA8Q9Y5G5 932 aa16.64■□□□□ 0.25
VPS52-215ENST00000464425 URB1O60287 2271 aaKnown RBP16.64■□□□□ 0.25
VPS52-215ENST00000464425 IQCF5A8MTL0 148 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 QSOX1O00391 747 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 TLX3O43711 291 aaPredicted RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 NDUFS3O75489 264 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 BANF1O75531 89 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 JMJD7P0C870 316 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 THRAP10827 490 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 ITIH1P19827 911 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 ECHS1P30084 290 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 ARCN1P48444 511 aaKnown RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 CARSP49589 748 aaKnown RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 CSE1LP55060 971 aaKnown RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 FRG1Q14331 258 aaKnown RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 PLCL1Q15111 1095 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 SPANXN3Q5MJ09 141 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 SDCCAG8Q86SQ7 713 aaPredicted RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 RELL1Q8IUW5 271 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 RSC1A1Q92681 617 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 FGF11Q92914 225 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 DCBLD2Q96PD2 775 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 FERD3LQ96RJ6 166 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 WDR83Q9BRX9 315 aaKnown RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 OR52A5Q9H2C5 316 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 EPB41L1Q9H4G0 881 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 ASCL3Q9NQ33 180 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 AKAP7Q9P0M2 348 aaPredicted RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 ZC3H7BQ9UGR2 993 aaKnown RBP16.63■□□□□ 0.25
VPS52-215ENST00000464425 PIKFYVEQ9Y2I7 2098 aa16.63■□□□□ 0.25
VPS52-215ENST00000464425 USP24Q9UPU5 2620 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 IFRD1O00458 451 aaPredicted RBP16.62■□□□□ 0.25
VPS52-215ENST00000464425 PRMT5O14744 637 aaPredicted RBP16.62■□□□□ 0.25
VPS52-215ENST00000464425 DXOO77932 396 aaKnown RBP16.62■□□□□ 0.25
VPS52-215ENST00000464425 GSTM1P09488 218 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 CCL4P13236 92 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 GFERP55789 205 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 GSTM4Q03013 218 aa16.62■□□□□ 0.25
VPS52-215ENST00000464425 RPA4Q13156 261 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms