RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TSPY26PQ9H489 355 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 C1GALT1Q9NS00 363 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 FKBPLQ9UIM3 349 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 BTRCQ9Y297 605 aa14.99□□□□□ -0.01
SKA3-204ENST00000462482 PCDHGA9Q9Y5G4 932 aaKnown RBP14.99□□□□□ -0.01
SKA3-204ENST00000462482 RAB40ALP0C0E4 278 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 CYP2A7P20853 494 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 PREPP48147 710 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 KPNA2P52292 529 aaKnown RBP14.98□□□□□ -0.01
SKA3-204ENST00000462482 COPS2P61201 443 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 IZUMO3Q5VZ72 239 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 C11orf63Q6NUN7 778 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 CPT1CQ8TCG5 803 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 N4BP2L2Q92802 583 aaPredicted RBP14.98□□□□□ -0.01
SKA3-204ENST00000462482 LRFN5Q96NI6 719 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 RUFY1Q96T51 708 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 TLR10Q9BXR5 811 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 TRIM55Q9BYV6 548 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 CHST8Q9H2A9 424 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 GOLPH3Q9H4A6 298 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 AKIRIN1Q9H9L7 192 aaPredicted RBP14.98□□□□□ -0.01
SKA3-204ENST00000462482 FEZ2Q9UHY8 353 aaPredicted RBP14.98□□□□□ -0.01
SKA3-204ENST00000462482 SERTAD3Q9UJW9 196 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 ZNF451Q9Y4E5 1061 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 PCDHGB7Q9Y5F8 929 aa14.98□□□□□ -0.01
SKA3-204ENST00000462482 ZFC3H1O60293 1989 aaKnown RBP14.98□□□□□ -0.01
SKA3-204ENST00000462482 C17orf113A0A1B0GUU1 675 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CCDC66A2RUB6 948 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CLEC18AA5D8T8 446 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 SLC9B1P1A6NJY1 282 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 MEN1O00255 615 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 PTMAP06454 111 aaKnown RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 ATP1B2P14415 290 aaPredicted RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 CA5AP35218 305 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CYLC1P35663 651 aaPredicted RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 PRLHRP49683 370 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 RRADP55042 308 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 NAP1L1P55209 391 aaKnown RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 EIF3EP60228 445 aaKnown RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 CHAF1BQ13112 559 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 GPS2Q13227 327 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 GPR33Q49SQ1 333 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 ANKRD20A2Q5SQ80 823 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 FHL5Q5TD97 284 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 ANKRD20A1Q5TYW2 823 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 ANKRD20A3Q5VUR7 823 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CAPRIN2Q6IMN6 1127 aaKnown RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 DARS2Q6PI48 645 aaKnown RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 SARM1Q6SZW1 724 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CLEC18BQ6UXF7 455 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 RANBP10Q6VN20 620 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 SNX20Q7Z614 316 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 NXPE1Q8N323 547 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CLEC18CQ8NCF0 446 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 GALNT11Q8NCW6 608 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 CALR3Q96L12 384 aaKnown RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 RMDN2Q96LZ7 410 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 APOL2Q9BQE5 337 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 NLNQ9BYT8 704 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 ACTR5Q9H9F9 607 aaPredicted RBP14.97□□□□□ -0.01
SKA3-204ENST00000462482 POMT2Q9UKY4 750 aa14.97□□□□□ -0.01
SKA3-204ENST00000462482 BLACEA4D250 179 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 TMEM150CB9EJG8 249 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 C9J4A7 227 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 KCNN4O15554 427 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 DPM1O60762 260 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 AGFG2O95081 481 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 IPO7O95373 1038 aaKnown RBP14.96□□□□□ -0.01
SKA3-204ENST00000462482 HBQ1P09105 142 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 AGXTP21549 392 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 PSMB4P28070 264 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 MARCKSL1P49006 195 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 TMPRSS15P98073 1019 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 OTUD4Q01804 1114 aaKnown RBP14.96□□□□□ -0.01
SKA3-204ENST00000462482 IL10RAQ13651 578 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 CPZQ66K79 652 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 FBXO38Q6PIJ6 1188 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 HPS6Q86YV9 775 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 CCDC170Q8IYT3 715 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 GPR135Q8IZ08 494 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 DSELQ8IZU8 1212 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 ENDOVQ8N8Q3 282 aaKnown RBP14.96□□□□□ -0.01
SKA3-204ENST00000462482 RNF214Q8ND24 703 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 ACTL9Q8TC94 416 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 ALS2CR12Q96Q35 445 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 C19orf43Q9BQ61 176 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 TBL1YQ9BQ87 522 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 MVB12BQ9H7P6 319 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 C10orf88Q9H8K7 445 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 ZDHHC3Q9NYG2 299 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 EFR3BQ9Y2G0 817 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 PADI2Q9Y2J8 665 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.01
SKA3-204ENST00000462482 C2orf74A8MZ97 194 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 TMEM63AO94886 807 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 PDGFAP04085 211 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 GSTM1P09488 218 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 RBP3P10745 1247 aa14.95□□□□□ -0.02
SKA3-204ENST00000462482 VARSP26640 1264 aaKnown RBP14.95□□□□□ -0.02
SKA3-204ENST00000462482 PRDX3P30048 256 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms