RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ZNF611Q8N823 705 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 OR52I2Q8NH67 350 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 SPATA22Q8NHS9 363 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 FIG4Q92562 907 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 SECISBP2LQ93073 1101 aaKnown RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ABTB1Q969K4 478 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ZBTB9Q96C00 473 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 SPDL1Q96EA4 605 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 VMP1Q96GC9 406 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 SCMH1Q96GD3 660 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 PRMT6Q96LA8 375 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 FAM81BQ96LP2 452 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 CSF3RQ99062 836 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 MGME1Q9BQP7 344 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 MLPHQ9BV36 600 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 THUMPD3Q9BV44 507 aaKnown RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 FNDC11Q9BVV2 318 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ANKRD2Q9GZV1 360 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 DPAGT1Q9H3H5 408 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 UBTD1Q9HAC8 227 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 GRPEL1Q9HAV7 217 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 PRMT7Q9NVM4 692 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF112Q9UJU3 913 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 ZFP37Q9Y6Q3 630 aaPredicted RBP2.92□□□□□ -1.94
HDAC6-212ENST00000461608 TAF1P21675 1872 aa2.92□□□□□ -1.94
HDAC6-212ENST00000461608 TRAV34A0A0B4J273 112 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 A0A0B4J293 547 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 A0A0G2JNG1 304 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 A0A0G2JPF8 293 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 MAGEA13PA6NCF6 341 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 HNRNPCL3B7ZW38 293 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PSMD14O00487 310 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PTGESO14684 152 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 IFIT3O14879 490 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 EIF3DO15371 548 aaKnown RBP eCLIP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 XRCC3O43542 346 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 RNASEH1O60930 286 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TOMM70O94826 608 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 CAMTA2O94983 1202 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 CELF2O95319 508 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SLU7O95391 586 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ATP5BP06576 529 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 HNRNPCL4P0DMR1 293 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 T-ENOLP0DO92 83 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SAGP10523 405 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 VDRP11473 427 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 MYOD1P15172 320 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 DNASE1P24855 282 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 CDC25CP30307 473 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 HOXA1P49639 335 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ALDH3A2P51648 485 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 BMXP51813 675 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ART1P52961 327 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 NAGLUP54802 743 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 RPS18P62269 152 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PPARDQ03181 441 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 RBPJQ06330 500 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TROAPQ12815 778 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TRAF3Q13114 568 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 MFAP5Q13361 173 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PPIGQ13427 754 aaKnown RBP eCLIP2.91□□□□□ -1.948e-10■■■□□ 18.6
HDAC6-212ENST00000461608 GTF2H2Q13888 395 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF273Q14593 569 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 KIR2DS5Q14953 304 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 FAM174BQ3ZCQ3 159 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 C6orf136Q5SQH8 315 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 RNASEH2BQ5TBB1 312 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 GRTP1Q5TC63 336 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 NDUFAF5Q5TEU4 345 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 C6orf163Q5TEZ5 329 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SFMBT2Q5VUG0 894 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 GTF2H2CQ6P1K8 395 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 KLC3Q6P597 504 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TRAT1Q6PIZ9 186 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PPP1R21Q6ZMI0 780 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ASB18Q6ZVZ8 466 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TMPRSS11FQ6ZWK6 438 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PHLDB2Q86SQ0 1253 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 LONP2Q86WA8 852 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TMEM219Q86XT9 240 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SPATA2LQ8IUW3 424 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 C4orf19Q8IY42 314 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ZNF34Q8IZ26 560 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 L3MBTL4Q8NA19 623 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ZBTB8BQ8NAP8 495 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 OR2AJ1Q8NGZ0 328 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 B4GALNT2Q8NHY0 566 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 TMED6Q8WW62 240 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 EXT2Q93063 718 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SPSB1Q96BD6 273 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 LYZL4Q96KX0 146 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 LINC00615Q96LM1 132 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 JAKMIP1Q96N16 626 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 MUS81Q96NY9 551 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 DUX5Q96PT3 197 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 MEIS3Q99687 375 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 INPP5KQ9BT40 448 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 RSPH9Q9H1X1 276 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 C2orf40Q9H1Z8 148 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms