RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 TMEM211Q6ICI0 200 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 KLHDC9Q8NEP7 349 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 LRRC8CQ8TDW0 803 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 ZNF473Q8WTR7 871 aaKnown RBP5.82□□□□□ -1.48
CKAP2-204ENST00000459902 UHRF2Q96PU4 802 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 OLFM1Q99784 485 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 SLF1Q9BQI6 1058 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 PELI2Q9HAT8 420 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 FAM118AQ9NWS6 357 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 PPIEQ9UNP9 301 aaKnown RBP5.82□□□□□ -1.48
CKAP2-204ENST00000459902 JRKLQ9Y4A0 524 aa5.82□□□□□ -1.48
CKAP2-204ENST00000459902 SPIN1Q9Y657 262 aaPredicted RBP5.82□□□□□ -1.48
CKAP2-204ENST00000459902 TCF20Q9UGU0 1960 aaKnown RBP5.82□□□□□ -1.48
CKAP2-204ENST00000459902 FIBPO43427 364 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 SLC22A3O75751 556 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 H1F0P07305 194 aaKnown RBP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 IL11P20809 199 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 DNASE1P24855 282 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 DCTP40126 519 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 CDH13P55290 713 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 LINC01547P58512 204 aaPredicted RBP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 DMP1Q13316 513 aaPredicted RBP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 MFAP5Q13361 173 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 C9orf50Q5SZB4 431 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 GRTP1Q5TC63 336 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 MFSD4BQ5TF39 518 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 TRMT1LQ7Z2T5 733 aaKnown RBP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 DCUN1D3Q8IWE4 304 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 GPALPP1Q8IXQ4 340 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 AFAP1Q8N556 730 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 CCDC89Q8N998 374 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 PAPD5Q8NDF8 572 aaKnown RBP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 MTERF3Q96E29 417 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 DPAGT1Q9H3H5 408 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 ZBTB20Q9HC78 741 aaPredicted RBP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 OSER1Q9NX31 292 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 NKIRAS2Q9NYR9 191 aa5.81□□□□□ -1.48
CKAP2-204ENST00000459902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.81□□□□□ -1.48
CKAP2-204ENST00000459902 MED24O75448 989 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 CSPG5O95196 566 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 NR1D2Q14995 579 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 CBWD6Q4V339 395 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 CBWD3Q5JTY5 395 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 USP43Q70EL4 1123 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 TMEM173Q86WV6 379 aaPredicted RBP5.8□□□□□ -1.48
CKAP2-204ENST00000459902 OR10S1Q8NGN2 331 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 ZNF354BQ96LW1 612 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 DGAT2Q96PD7 388 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 FNDC11Q9BVV2 318 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 CCDC106Q9BWC9 280 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 GOLPH3LQ9H4A5 285 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 ACKR4Q9NPB9 350 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.8□□□□□ -1.48
CKAP2-204ENST00000459902 TTLL3Q9Y4R7 772 aa5.8□□□□□ -1.48
CKAP2-204ENST00000459902 A0A0B4J293 547 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 MED19A0JLT2 244 aaPredicted RBP5.79□□□□□ -1.48
CKAP2-204ENST00000459902 P4HA2O15460 535 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 ABCB1P08183 1280 aaPredicted RBP5.79□□□□□ -1.48
CKAP2-204ENST00000459902 TIMP3P35625 211 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 MATR3P43243 847 aaKnown RBP eCLIP5.79□□□□□ -1.48
CKAP2-204ENST00000459902 NR2C2P49116 596 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 SNAPC1Q16533 368 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 KRTAP24-1Q3LI83 254 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 TECRLQ5HYJ1 363 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 WDR38Q5JTN6 314 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 NAA16Q6N069 864 aaPredicted RBP5.79□□□□□ -1.48
CKAP2-204ENST00000459902 SLC27A1Q6PCB7 646 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 LSMEM1Q8N8F7 131 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 MOSPD2Q8NHP6 518 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 STAMBPL1Q96FJ0 436 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 PSD2Q9BQI7 771 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 CLIC5Q9NZA1 410 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 WDR81Q562E7 1941 aa5.79□□□□□ -1.48
CKAP2-204ENST00000459902 SOS1Q07889 1333 aaPredicted RBP5.78□□□□□ -1.48
CKAP2-204ENST00000459902 FEZF1A0PJY2 475 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 ANKUB1A6NFN9 424 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 TOMM70O94826 608 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 NR3C1P04150 777 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 EPHA2P29317 976 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 RPS18P62269 152 aaKnown RBP5.78□□□□□ -1.48
CKAP2-204ENST00000459902 RNASEH2BQ5TBB1 312 aaKnown RBP5.78□□□□□ -1.48
CKAP2-204ENST00000459902 DGLUCYQ7Z3D6 616 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 ZNF595Q8IYB9 648 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 CEP57L1Q8IYX8 460 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 CPSF7Q8N684 471 aaKnown RBP5.78□□□□□ -1.48
CKAP2-204ENST00000459902 POGLUT1Q8NBL1 392 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 OR2T12Q8NG77 320 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 OR5M8Q8NGP6 311 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 CFAP61Q8NHU2 1237 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 PGLYRP2Q96PD5 576 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 MS4A10Q96PG2 267 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 TBC1D17Q9HA65 648 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 EQTNQ9NQ60 294 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 HAO2Q9NYQ3 351 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 ANAPC2Q9UJX6 822 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 ACAD8Q9UKU7 415 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 TRPV2Q9Y5S1 764 aa5.78□□□□□ -1.48
CKAP2-204ENST00000459902 SYNDIG1LA6NDD5 238 aa5.77□□□□□ -1.49
CKAP2-204ENST00000459902 PRR32B1ATL7 298 aa5.77□□□□□ -1.49
CKAP2-204ENST00000459902 ERVV-2B6SEH9 535 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms