RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 RUVBL2Q9Y230 463 aaKnown RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
COL18A1-206ENST00000459895 PCNX2A6NKB5 2137 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 GOLGA4Q13439 2230 aaKnown RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 A0A1W2PQM1 296 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 LILRA5A6NI73 299 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 FAM159BA6NKW6 160 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 OR5K4A6NMS3 321 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 CXorf49A8MYA2 514 aaPredicted RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 E5RI56 91 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 F8W8V4 182 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 H3BMM5 538 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 OPA1O60313 960 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 SLU7O95391 586 aaKnown RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 VIPP01282 170 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 XRCC1P18887 633 aaPredicted RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 STX2P32856 288 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 MAPK9P45984 424 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 CLCN7P51798 805 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 OR1D5P58170 312 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 HSPA14Q0VDF9 509 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 RPA4Q13156 261 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 GBX1Q14549 363 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 SLC22A15Q8IZD6 547 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 AVL9Q8NBF6 648 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 SIDT2Q8NBJ9 832 aaKnown RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 GABPB2Q8TAK5 448 aaPredicted RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 CD200R1Q8TD46 325 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 KCNJ9Q92806 393 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 TMEM159Q96B96 161 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 AARSD1Q9BTE6 412 aaKnown RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 TBC1D10AQ9BXI6 508 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 ZMYND15Q9H091 742 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 CCDC68Q9H2F9 335 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 ATXN7L1Q9ULK2 861 aaPredicted RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 CNOT1A5YKK6 2376 aaKnown RBP12.53□□□□□ -0.4
COL18A1-206ENST00000459895 ASXL3Q9C0F0 2248 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 WDFY3Q8IZQ1 3526 aa12.53□□□□□ -0.4
COL18A1-206ENST00000459895 IGHV1OR21-1A0A087WYE8 117 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 NTN3O00634 580 aaPredicted RBP12.52□□□□□ -0.41
COL18A1-206ENST00000459895 GPC4O75487 556 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 ACSL3O95573 720 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 AHSGP02765 367 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 APOA4P06727 396 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 ADRB1P08588 477 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 GSTA2P09210 222 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 FAM153BP0C7A2 387 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 PNLIPP16233 465 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 SPINK2P20155 84 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 TNFRSF8P28908 595 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 PGGT1BP53609 377 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 CDKN2DP55273 166 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 CCL7P80098 99 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 TIAL1Q01085 375 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL18A1-206ENST00000459895 KBTBD12Q3ZCT8 623 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 FAM153CQ494X1 144 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 ZNF449Q6P9G9 518 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 OTOAQ7RTW8 1153 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 TMPRSS9Q7Z410 1059 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 STRA8Q7Z7C7 330 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 SLC26A11Q86WA9 606 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 RELL1Q8IUW5 271 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 CHCHD4Q8N4Q1 142 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 GPATCH11Q8N954 259 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 ACVR1CQ8NER5 493 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 OR5AR1Q8NGP9 310 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 RSC1A1Q92681 617 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 SLC38A3Q99624 504 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 GPR21Q99679 349 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 OLFM1Q99784 485 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 NUDT22Q9BRQ3 303 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 MCMBPQ9BTE3 642 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 SLC40A1Q9NP59 571 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 KCNK4Q9NYG8 393 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 OGFRQ9NZT2 677 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 KLK13Q9UKR3 277 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 WASF3Q9UPY6 502 aa12.52□□□□□ -0.41
COL18A1-206ENST00000459895 AKAP13Q12802 2813 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 IFRD1O00458 451 aaPredicted RBP12.51□□□□□ -0.41
COL18A1-206ENST00000459895 VPS26AO75436 327 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 SPAG6O75602 509 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 FDXRP22570 491 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 ACADLP28330 430 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 ALDH4A1P30038 563 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 ATP5DP30049 168 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 BDKRB1P46663 353 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 CAPZBP47756 277 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 EPHA4P54764 986 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 SPIDRQ14159 915 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 PLCL1Q15111 1095 aa12.51□□□□□ -0.41
COL18A1-206ENST00000459895 KYNUQ16719 465 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms