RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	CAPN12	Q6ZSI9	719 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	SLC9B2	Q86UD5	537 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	PDZD3	Q86UT5	571 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	CACTIN-AS1	Q8N1I8	211 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	PHC3	Q8NDX5	983 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	MNS1	Q8NEH6	495 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	ACVR1C	Q8NER5	493 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	RSC1A1	Q92681	617 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	ATXN7L3B	Q96GX2	97 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	C9orf72	Q96LT7	481 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	C12orf66	Q96MD2	445 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	TCF12	Q99081	682 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	NAT9	Q9BTE0	207 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	SEMA6C	Q9H3T2	930 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	UCK1	Q9HA47	277 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	POT1	Q9NUX5	634 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	IMP3	Q9NV31	184 aa	Known RBP	10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	INTS10	Q9NVR2	710 aa	Known RBP	10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	KCNK4	Q9NYG8	393 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	ANGPTL2	Q9UKU9	493 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	ACSL5	Q9ULC5	683 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	MSRB2	Q9Y3D2	182 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	CFAP47	Q6ZTR5	3102 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	CEP295	Q9C0D2	2601 aa		10.02	□□□□□ -0.81
MRPL55-223	ENST00000459783	AKAP13	Q12802	2813 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	KLHL33	A6NCF5	533 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	KRT87P	A6NCN2	255 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	CXorf49	A8MYA2	514 aa	Predicted RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	QSOX1	O00391	747 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	LIN7A	O14910	233 aa	Predicted RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	EIF3H	O15372	352 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	TCEA3	O75764	348 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SLCO2B1	O94956	709 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	VIP	P01282	170 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	AHSG	P02765	367 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	ESR1	P03372	595 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	GSTM1	P09488	218 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	PKM	P14618	531 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SLC2A4	P14672	509 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	JUP	P14923	745 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	MPST	P25325	297 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	HAL	P42357	657 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	LEPR	P48357	1165 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	CARS	P49589	748 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	CLCN7	P51798	805 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	GSTM4	Q03013	218 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	RPA4	Q13156	261 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SQSTM1	Q13501	440 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SPIDR	Q14159	915 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	RNF187	Q5TA31	235 aa	Predicted RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	PTRHD1	Q6GMV3	140 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	RBM44	Q6ZP01	1051 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	LRRC6	Q86X45	466 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SLC22A15	Q8IZD6	547 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	GALNT15	Q8N3T1	639 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	CEP112	Q8N8E3	955 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	LMNTD1	Q8N9Z9	388 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	OR5AR1	Q8NGP9	310 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	CXorf40B	Q96DE9	158 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	PRR11	Q96HE9	360 aa	Predicted RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	GFM1	Q96RP9	751 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	NDN	Q99608	321 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	TTC1	Q99614	292 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SLC38A3	Q99624	504 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	FAM167B	Q9BTA0	163 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	MCMBP	Q9BTE3	642 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	ABCG4	Q9H172	646 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	SLC24A2	Q9UI40	661 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	GNPTG	Q9UJJ9	305 aa		10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	RUVBL2	Q9Y230	463 aa	Known RBP	10.01	□□□□□ -0.81
MRPL55-223	ENST00000459783	IGHV5-10-1	A0A0J9YXX1	117 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	TCRBV9S1A1T	A0A576	114 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	TRABD2B	A6NFA1	517 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	ESPN	B1AK53	854 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	C1QTNF9B	B2RNN3	333 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	AGRP	O00253	132 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	CPNE6	O95741	557 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	C1QTNF9	P0C862	333 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	TYRP1	P17643	537 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	PPARG	P37231	505 aa	Predicted RBP	10	□□□□□ -0.81
MRPL55-223	ENST00000459783	MAGEA4	P43358	317 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	MAPK9	P45984	424 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	CD151	P48509	253 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	EPHA4	P54764	986 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	CDKN2D	P55273	166 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	GFER	P55789	205 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	HSPA14	Q0VDF9	509 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	GRB7	Q14451	532 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	C16orf72	Q14CZ0	275 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	ACSBG2	Q5FVE4	666 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	PIM3	Q86V86	326 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	CCDC25	Q86WR0	208 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	TRIM48	Q8IWZ4	208 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	LMNTD2	Q8IXW0	634 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	SIDT2	Q8NBJ9	832 aa	Known RBP	10	□□□□□ -0.81
MRPL55-223	ENST00000459783	GSDMB	Q8TAX9	411 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	CD200R1	Q8TD46	325 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	PYROXD1	Q8WU10	500 aa		10	□□□□□ -0.81
MRPL55-223	ENST00000459783	TFG	Q92734	400 aa	Predicted RBP	10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms