RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CD180Q99467 661 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 SPRY4Q9C004 299 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 IL22Q9GZX6 179 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 APMAPQ9HDC9 416 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 HRASLS2Q9NWW9 162 aa15.72■□□□□ 0.11
COL7A1-203ENST00000459756 TRMT1Q9NXH9 659 aaKnown RBP15.72■□□□□ 0.11
COL7A1-203ENST00000459756 TMEM184BQ9Y519 407 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-203ENST00000459756 LIN7AO14910 233 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 ZSCAN12O43309 604 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 RAD1O60671 282 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 STK17BO94768 372 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 GOT2P00505 430 aaKnown RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 FTH1P02794 183 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 NELFEP18615 380 aaKnown RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 TPSB2P20231 275 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 MAP4P27816 1152 aaKnown RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 PPARGP37231 505 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 NPY2RP49146 381 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 PPP1CAP62136 330 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 PRAMEP78395 509 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 FOXM1Q08050 763 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 TPSAB1Q15661 275 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 TAF1BQ53T94 588 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 DNTTIP2Q5QJE6 756 aaKnown RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 KIAA1614Q5VZ46 1190 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 ARMC6Q6NXE6 501 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 CYB5D1Q6P9G0 228 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 KMT5CQ86Y97 462 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 NLGN4XQ8N0W4 816 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 RASGEF1CQ8N431 466 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 ACVR1CQ8NER5 493 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 NLGN4YQ8NFZ3 816 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 TTC9Q92623 222 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 ZNF778Q96MU6 729 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 NAP1L3Q99457 506 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 TRIT1Q9H3H1 467 aaKnown RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 MVB12BQ9H7P6 319 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 BFARQ9NZS9 450 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 TTC7AQ9ULT0 858 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-203ENST00000459756 PCDHGA4Q9Y5G9 962 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 PRSS21Q9Y6M0 314 aa15.71■□□□□ 0.11
COL7A1-203ENST00000459756 IGHV5-51A0A0C4DH38 117 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 OR6C74A6NCV1 312 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 TLCD2A6NGC4 264 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 OR56A5P0C7T3 313 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 PDHA2P29803 388 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 PREPP48147 710 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 SESN2P58004 480 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-203ENST00000459756 SH3BP2P78314 561 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 FASTKD1Q53R41 847 aaKnown RBP15.7■□□□□ 0.1
COL7A1-203ENST00000459756 AARS2Q5JTZ9 985 aaKnown RBP15.7■□□□□ 0.1
COL7A1-203ENST00000459756 PCSK4Q6UW60 755 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 ZNF534Q76KX8 674 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 REXO1L1PQ8IX06 675 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 CARFQ8N187 725 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 LCN9Q8WX39 176 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 OR6C1Q96RD1 312 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 FERD3LQ96RJ6 166 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 CHRAC1Q9NRG0 131 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 PYCARDQ9ULZ3 195 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 ATRXP46100 2492 aa15.7■□□□□ 0.1
COL7A1-203ENST00000459756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 UBA6A0AVT1 1052 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 MATN2O00339 956 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 DLGAP3O95886 979 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 ITGB2P05107 769 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 FGF5P12034 268 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 PLOD1Q02809 727 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 PRKAA1Q13131 559 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 MAP7Q14244 749 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 SIDT2Q8NBJ9 832 aaKnown RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 OR4E2Q8NGC2 313 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 ELMO1Q92556 727 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 TFGQ92734 400 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 MAGOHBQ96A72 148 aaKnown RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 KIAA1143Q96AT1 154 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 MS4A14Q96JA4 679 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 MAP3K3Q99759 626 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 ULBP3Q9BZM4 244 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 SRMSQ9H3Y6 488 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 TFB2MQ9H5Q4 396 aaKnown RBP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 CATSPERZQ9NTU4 200 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 ANAPC5Q9UJX4 755 aa15.69■□□□□ 0.1
COL7A1-203ENST00000459756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL7A1-203ENST00000459756 PGRMC1O00264 195 aaKnown RBP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 KIF5CO60282 957 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 OR1I1O60431 355 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 LIFP15018 202 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 WT1P19544 449 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 MAGEA6P43360 314 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 TTPAP49638 278 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 ARL4DP49703 201 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 CRADDP78560 199 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 HSD11B2P80365 405 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 SARNPP82979 210 aaKnown RBP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 ABHD18Q0P651 414 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 GPS1Q13098 491 aa15.68■□□□□ 0.1
COL7A1-203ENST00000459756 BOP1Q14137 746 aaKnown RBP15.68■□□□□ 0.1
COL7A1-203ENST00000459756 CYP1B1Q16678 543 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms