RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 BCL7AQ4VC05 210 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TECRLQ5HYJ1 363 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CTSL3PQ5NE16 218 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 SEL1L3Q68CR1 1132 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 NXNQ6DKJ4 435 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ARMC6Q6NXE6 501 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ZNF549Q6P9A3 640 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TMEM92Q6UXU6 159 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 UNC5DQ6UXZ4 953 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CEP68Q76N32 757 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ADGRG6Q86SQ4 1221 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CLEC14AQ86T13 490 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ISCA2Q86U28 154 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 PIM3Q86V86 326 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 MYLK4Q86YV6 388 aaPredicted RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 SYTL1Q8IYJ3 562 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 LRRC34Q8IZ02 419 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 PLD6Q8N2A8 252 aaKnown RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 RASGEF1AQ8N9B8 481 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 SNX31Q8N9S9 440 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ZNF473Q8WTR7 871 aaKnown RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 REPS1Q96D71 796 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CXorf40BQ96DE9 158 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 LRRC37BQ96QE4 947 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 HHIPQ96QV1 700 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 FERD3LQ96RJ6 166 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 MYOCQ99972 504 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 MCMBPQ9BTE3 642 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 HGH1Q9BTY7 390 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TEX101Q9BY14 249 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 GSDMCQ9BYG8 508 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TPSD1Q9BZJ3 242 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CHRDQ9H2X0 955 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TRIT1Q9H3H1 467 aaKnown RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CARS2Q9HA77 564 aaKnown RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 RDH14Q9HBH5 336 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 CYP4F12Q9HCS2 524 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 NPHS2Q9NP85 383 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 MID1IP1Q9NPA3 183 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 RIC8BQ9NVN3 520 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 NMRK1Q9NWW6 199 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 USP36Q9P275 1121 aaKnown RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ATXN10Q9UBB4 475 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 SUSD2Q9UGT4 822 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 MUTYHQ9UIF7 546 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 RAB23Q9ULC3 237 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 ASF1AQ9Y294 204 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TMEM98Q9Y2Y6 226 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 DYRK1BQ9Y463 629 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 OARD1Q9Y530 152 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 OR1A2Q9Y585 309 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 USH1CQ9Y6N9 552 aa5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 TDRD6O60522 2096 aaKnown RBP5.73□□□□□ -1.49
RNU1-88P-201ENST00000459274 F5P12259 2224 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 COL4A2P08572 1712 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CCDC163A0A0D9SF12 145 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 PRSS38A1L453 326 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 KRBA1A5PL33 1030 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 NEMP2A6NFY4 417 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 OR5K4A6NMS3 321 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 METTL12A8MUP2 240 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 TK2O00142 265 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CDC7O00311 574 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 DCXO43602 365 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 PI15O43692 258 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 DLX3O60479 287 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 STK16O75716 305 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 ATP5HO75947 161 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 SLCO2B1O94956 709 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 IGLV3-19P01714 112 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 KRT6AP02538 564 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 KRT6BP04259 564 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 DHRS4L1P0CG22 281 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 PRSS56P0CW18 603 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 ACP5P13686 325 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 ZNF8P17098 575 aaPredicted RBP5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 NCF2P19878 526 aaPredicted RBP5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 COL9A1P20849 921 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CXCR2P25025 360 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CD27P26842 260 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CD38P28907 300 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 EEF1DP29692 281 aaKnown RBP5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CCR7P32248 378 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CNR2P34972 360 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 GRK3P35626 688 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 ETV4P43268 484 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 GNPDA1P46926 289 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 KRT6CP48668 564 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 MNAT1P51948 309 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 METAP1P53582 386 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 PKNOX1P55347 436 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 TAS2R38P59533 333 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 STX1BP61266 288 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 BST1Q10588 318 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 CDC16Q13042 620 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 NFATC4Q14934 902 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 NAA25Q14CX7 972 aa5.72□□□□□ -1.49
RNU1-88P-201ENST00000459274 PCLAFQ15004 111 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms