RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ABCF3Q9NUQ8 709 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 KCTD5Q9NXV2 234 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 WSB2Q9NYS7 404 aaPredicted RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 EIF2B4Q9UI10 523 aaKnown RBP8.56□□□□□ -1.04
RIF1-208ENST00000457745 ZDHHC2Q9UIJ5 367 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 RNF112Q9ULX5 631 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 PDE10AQ9Y233 779 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 COMMD10Q9Y6G5 202 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 COL6A3P12111 3177 aa8.56□□□□□ -1.04
RIF1-208ENST00000457745 TNRC6BQ9UPQ9 1833 aaKnown RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 FANCMQ8IYD8 2048 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 NDUFAB1O14561 156 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 HGSO14964 777 aaPredicted RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 IPO13O94829 963 aaKnown RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 SLCO2B1O94956 709 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 AP2A2O94973 939 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 FSBPO95073 299 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 GUCA1CO95843 209 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 WNT1P04628 370 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 CELA2BP08218 269 aaPredicted RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 RBP1P09455 135 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 OR56A5P0C7T3 313 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 TDGF1P13385 188 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 EEF1DP29692 281 aaKnown RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 DGKEP52429 567 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 DNAJB13P59910 316 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 PFN3P60673 137 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 ATP6V0D1P61421 351 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 NFKB2Q00653 900 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 ZBTB16Q05516 673 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 ABRQ12979 859 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 RCN2Q14257 317 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 GRB7Q14451 532 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 TGFBIQ15582 683 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 TCHHL1Q5QJ38 904 aaPredicted RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 KIAA0895LQ68EN5 471 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 C6orf89Q6UWU4 347 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 SPATA21Q7Z572 469 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 LCA5Q86VQ0 697 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 TRAPPC5Q8IUR0 188 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 GJD3Q8N144 294 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 NKAPQ8N5F7 415 aaKnown RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 DCBLD1Q8N8Z6 715 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 TMEM145Q8NBT3 493 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 OR2T34Q8NGX1 318 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 CCL4L1Q8NHW4 92 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 RHEBL1Q8TAI7 183 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 GABPB2Q8TAK5 448 aaPredicted RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 BIRC7Q96CA5 298 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 L3HYPDHQ96EM0 354 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 DCUN1D1Q96GG9 259 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 SLC45A3Q96JT2 553 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 C7orf26Q96N11 449 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 KCNA7Q96RP8 456 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 UHRF1Q96T88 793 aaPredicted RBP8.55□□□□□ -1.04
RIF1-208ENST00000457745 CCM2Q9BSQ5 444 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 APOOQ9BUR5 198 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 GPR174Q9BXC1 333 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 ZDHHC5Q9C0B5 715 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 DRC3Q9H069 523 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 SYTL2Q9HCH5 934 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 GIMAP2Q9UG22 337 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 KLF15Q9UIH9 416 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 DCTN4Q9UJW0 460 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 PCTPQ9UKL6 214 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 SH2B3Q9UQQ2 575 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 WDR37Q9Y2I8 494 aa8.55□□□□□ -1.04
RIF1-208ENST00000457745 MPC1LP0DKB6 136 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 ACADMP11310 421 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 MYCLP1P12525 358 aaPredicted RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 ACP5P13686 325 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 NFKBIAP25963 317 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 MAOBP27338 520 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 ACADLP28330 430 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 TEAD1P28347 426 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 HSPA7P48741 367 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 HTR6P50406 440 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 YBX1P67809 324 aaKnown RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 ARHGAP8P85298 464 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 LRRC32Q14392 662 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SETDB1Q15047 1291 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SLC9B1Q4ZJI4 515 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 CLEC6AQ6EIG7 209 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 FRMD7Q6ZUT3 714 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SYVN1Q86TM6 617 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 ALYREFQ86V81 257 aaKnown RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 KBTBD6Q86V97 674 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 GPSM1Q86YR5 675 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 WDR75Q8IWA0 830 aaKnown RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 SLC22A15Q8IZD6 547 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 MAML2Q8IZL2 1156 aaPredicted RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 MYO1HQ8N1T3 1032 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 FBXO39Q8N4B4 442 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 OXR1Q8N573 874 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 PDPRQ8NCN5 879 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 OR13H1Q8NG92 308 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 CFAP61Q8NHU2 1237 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 ZNF483Q8TF39 744 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms