RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 NTRK2Q16620 822 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 KLHL40Q2TBA0 621 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 BCL7AQ4VC05 210 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 PIP5KL1Q5T9C9 394 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ARMC12Q5T9G4 340 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 PLA2G4FQ68DD2 849 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 CLEC6AQ6EIG7 209 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 C1orf94Q6P1W5 598 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 LRRC70Q7Z2Q7 622 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ADGRE4PQ86SQ3 457 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ADGRA1Q86SQ6 560 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 CCDC117Q8IWD4 279 aaPredicted RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 NELFCDQ8IXH7 590 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 GPR65Q8IYL9 337 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 PM20D2Q8IYS1 436 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ASCC1Q8N9N2 400 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 FSIP1Q8NA03 581 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 FNDC5Q8NAU1 212 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 BPIFCQ8NFQ6 507 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 MITD1Q8WV92 249 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 TSEN15Q8WW01 171 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 CCDC51Q96ER9 411 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 RMND5BQ96G75 393 aaPredicted RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 ZDHHC12Q96GR4 267 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 SAMD8Q96LT4 415 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 DHRS9Q9BPW9 319 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 PIMREGQ9BSJ6 248 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 CALN1Q9BXU9 219 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ACE2Q9BYF1 805 aaPredicted RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 MTIF3Q9H2K0 278 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 VCX2Q9H322 139 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 OSGEPL1Q9H4B0 414 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 TDRD3Q9H7E2 651 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 C14orf93Q9H972 538 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 POLR1BQ9H9Y6 1135 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 MRPS30Q9NP92 439 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 TM7SF3Q9NS93 570 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 DNAJC28Q9NX36 388 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 BARHL2Q9NY43 387 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 SMARCAL1Q9NZC9 954 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 MYO1AQ9UBC5 1043 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 CTSFQ9UBX1 484 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ANAPC2Q9UJX6 822 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 USP18Q9UMW8 372 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 ENTPD4Q9Y227 616 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 STRAPQ9Y3F4 350 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 NOC2LQ9Y3T9 749 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 FAM32AQ9Y421 112 aaKnown RBP5.35□□□□□ -1.55
VPS41-209ENST00000457055 PCDHA3Q9Y5H8 950 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 PCDHA10Q9Y5I2 948 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 AP4B1Q9Y6B7 739 aa5.35□□□□□ -1.55
VPS41-209ENST00000457055 PPLO60437 1756 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 LMO7Q8WWI1 1683 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 KCPQ6ZWJ8 1503 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CPDO75976 1380 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 A0A087X1B8 175 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FAM237AA0A1B0GTK4 181 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FAM230AA0A1W2PPH8 454 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PRAMEF22A3QJZ6 481 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 BTBD17A6NE02 478 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CENPBD1B2RD01 187 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PODXLO00592 558 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ALOX15BO15296 676 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PSMD10O75832 226 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 RHOBTB1O94844 696 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 RPP14O95059 124 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 LUC7L3O95232 432 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 NSA2O95478 260 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 RAB3DO95716 219 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CRYZL1O95825 349 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 LDLRP01130 860 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TK1P04183 234 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 KRT8P05787 483 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 YES1P07947 543 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ITGA2BP08514 1039 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 LINGO3P0C6S8 592 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 UBTFL1P0CB47 393 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 GSTT2P0CG29 244 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 GSTT2BP0CG30 244 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 NPR1P16066 1061 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 AGXTP21549 392 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FGFR2P21802 821 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CCNE1P24864 410 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 IL12RB1P42701 662 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ALDH1A3P47895 512 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 SLC1A6P48664 564 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PIK3CGP48736 1102 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 HARS2P49590 506 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 ENTPD1P49961 510 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 NLRP11P59045 1033 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 SRP54P61011 504 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 SKP1P63208 163 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TAP1Q03518 808 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 RASGEF1BQ0VAM2 473 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CRHR2Q13324 411 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 MAPK6Q16659 721 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FAM187BQ17R55 369 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FASTKD1Q53R41 847 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 FNDC7Q5VTL7 733 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms