RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NR2C2APQ86WQ0 139 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 RIOX2Q8IUF8 465 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 AQP12AQ8IXF9 295 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SYTL1Q8IYJ3 562 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 KCTD17Q8N5Z5 321 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 FLCNQ8NFG4 579 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CENPIQ92674 756 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 HMG20AQ9NP66 347 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 POLG2Q9UHN1 485 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF214Q9UL59 606 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ABCG2Q9UNQ0 655 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PCDHGB6Q9Y5F9 930 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ICE1Q9Y2F5 2266 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 GREB1Q4ZG55 1949 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 A0A1W2PQ09 198 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 E9PQ18 207 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 UBXN8O00124 270 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PRAMEF4O60810 478 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 GCM2O75603 506 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PIRTP0C851 137 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CD36P16671 472 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CTRB1P17538 263 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 HOXD10P28358 340 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TNFSF8P32971 234 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 KRT20P35900 424 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ARL2P36404 184 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ILF2Q12905 390 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 INSL4Q14641 139 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 OR4D1Q15615 310 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 PRAMEF9Q5VWM5 478 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CTRB2Q6GPI1 263 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ERAP2Q6P179 960 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 C16orf89Q6UX73 402 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZPBP2Q6X784 338 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ANKS3Q6ZW76 656 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 DCP1BQ8IZD4 617 aaKnown RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MCFD2Q8NI22 146 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 MAGEB10Q96LZ2 347 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 ZDHHC15Q96MV8 337 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC6A18Q96N87 628 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 CGRRF1Q99675 332 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 POLR3FQ9H1D9 316 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 LHX5Q9H2C1 402 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 POLMQ9NP87 494 aaPredicted RBP4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 DKK3Q9UBP4 350 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 BAG5Q9UL15 447 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 RWDD3Q9Y3V2 267 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 COL4A5P29400 1685 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 NRXN2Q9P2S2 1712 aa4.47□□□□□ -1.69
DEPDC1-202ENST00000456315 SYNJ2BP-COX16A0A087WUM0 186 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 HAT1O14929 419 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 PLA2G6O60733 806 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC4A1P02730 911 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 PRR35P0CG20 571 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 SRCP12931 536 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 CXCL3P19876 107 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP2B6P20813 491 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 CHMP24386 653 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 RPS19P39019 145 aaKnown RBP4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 DAPP51397 102 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 CREMQ03060 361 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 RBBP4Q09028 425 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 HYAL2Q12891 473 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 BNIP2Q12982 314 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 HERC3Q15034 1050 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 C18orf21Q32NC0 220 aaPredicted RBP4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 KIAA0319Q5VV43 1072 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 CCDC190Q86UF4 302 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 LAX1Q8IWV1 398 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 ADGRG2Q8IZP9 1017 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 FBXO30Q8TB52 745 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 PABPC5Q96DU9 382 aaKnown RBP4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 CCDC138Q96M89 665 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 QKIQ96PU8 341 aaKnown RBP eCLIP4.46□□□□□ -1.691e-6■□□□□ 9.1
DEPDC1-202ENST00000456315 YME1L1Q96TA2 773 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 PHOX2BQ99453 314 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 TBCDQ9BTW9 1192 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 MSTO1Q9BUK6 570 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 C2orf49Q9BVC5 232 aaPredicted RBP4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 SORBS1Q9BX66 1292 aaKnown RBP4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 GOLGA2P5Q9HBQ8 144 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 TAS2R9Q9NYW1 312 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 COX16Q9P0S2 106 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 V9GYH0 126 aa4.46□□□□□ -1.69
DEPDC1-202ENST00000456315 TET1Q8NFU7 2136 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PRR23AA6NEV1 266 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 B4DXG7 233 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC22A1O15245 554 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 GPX5O75715 221 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SUPT7LO94864 414 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 VIPP01282 170 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 JCHAINP01591 159 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ITGB3P05106 788 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CALB1P05937 261 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 HOXD4P09016 255 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 HBQ1P09105 142 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ADORA3P0DMS8 318 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 THRBP10828 461 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms