RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GTF2H2Q13888 395 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 E2F2Q14209 437 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 GRM2Q14416 872 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 LSM12Q3MHD2 195 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SYTL3Q4VX76 610 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 AGBL4Q5VU57 503 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 LIPJQ5W064 366 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 GTF2H2CQ6P1K8 395 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PNCKQ6P2M8 343 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 C16orf89Q6UX73 402 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TRIM69Q86WT6 500 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TEX9Q8N6V9 391 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 OR2L2Q8NH16 312 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SETD7Q8WTS6 366 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PHF21BQ96EK2 531 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 CHFRQ96EP1 664 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SMIM14Q96QK8 99 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 NELL2Q99435 816 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SERPINI1Q99574 410 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TIMM29Q9BSF4 260 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 BOCQ9BWV1 1114 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PCBD2Q9H0N5 130 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 EHD1Q9H4M9 534 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 EFCAB1Q9HAE3 211 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SGK2Q9HBY8 427 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ZBTB26Q9HCK0 441 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 MID1IP1Q9NPA3 183 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PHPT1Q9NRX4 125 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 CNOT6Q9ULM6 557 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PPT2Q9UMR5 302 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 MRPS17Q9Y2R5 130 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 AP3M1Q9Y2T2 418 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PRSS21Q9Y6M0 314 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 UBDO15205 165 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 KMOO15229 486 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 MBTPS2O43462 519 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 KRT6AP02538 564 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 KRT6BP04259 564 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 KRT16P08779 473 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SRFP11831 508 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 KELP23276 732 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 OXTRP30559 389 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SERPINB1P30740 379 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SLC6A12P48065 614 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PSMD8P48556 350 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 KRT6CP48668 564 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SH3BP2P78314 561 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PPARDQ03181 441 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 FOXM1Q08050 763 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 CNTN1Q12860 1018 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 BOP1Q14137 746 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 LRRC32Q14392 662 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 GRIN2CQ14957 1233 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SMAD1Q15797 465 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TMEM259Q4ZIN3 620 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 XKR7Q5GH72 579 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PRMT9Q6P2P2 845 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 UBE2R2Q712K3 238 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TRIM46Q7Z4K8 759 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 MMAAQ8IVH4 418 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 RASGEF1AQ8N9B8 481 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 L3MBTL4Q8NA19 623 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ELMO1Q92556 727 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ROPN1LQ96C74 230 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SGF29Q96ES7 293 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SCARF2Q96GP6 870 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 PPP3R2Q96LZ3 170 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ANKRD27Q96NW4 1050 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SLC30A3Q99726 388 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SLC25A23Q9BV35 468 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 SARS2Q9NP81 518 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 WWOXQ9NZC7 414 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 MARCOQ9UEW3 520 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 POLG2Q9UHN1 485 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ADGRE2Q9UHX3 823 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 HCN2Q9UL51 889 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TMED5Q9Y3A6 229 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 ANGPTL3Q9Y5C1 460 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TRANK1O15050 2925 aa6.7□□□□□ -1.34
ECHDC1-210ENST00000454859 TRPM6Q9BX84 2022 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 NEMP2A6NFY4 417 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 LILRB5O75023 590 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SOD1P00441 154 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 HGFP14210 728 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 HNF4AP41235 474 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 CCR5P51681 352 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 CCNG1P51959 295 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 HK3P52790 923 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 KIAA1024LP59773 190 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 ERVK-8P63133 956 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SGCGQ13326 291 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 LAPTM5Q13571 262 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 CYLC2Q14093 348 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 PTK2BQ14289 1009 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SMAD2Q15796 467 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 LEXMQ3ZCV2 418 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SLC9B1Q4ZJI4 515 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 PDCD4Q53EL6 469 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms