RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 DPM1O60762 260 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CNOT3O75175 753 aaKnown RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CEACAM4O75871 244 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZBTB11O95625 1053 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MT-ND3P03897 115 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SERPING1P05155 500 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GPR89BP0CG08 455 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 POU3F2P20265 443 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DEKP35659 375 aaKnown RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PBX1P40424 430 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 VAV2P52735 878 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PDE1BQ01064 536 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ACY1Q03154 408 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRKG2Q13237 762 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GSE1Q14687 1217 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PDK2Q15119 407 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRKD1Q15139 912 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZIC1Q15915 447 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HIF1AQ16665 826 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PLEKHN1Q494U1 663 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FILIP1LQ4L180 1135 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IZUMO3Q5VZ72 239 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PAPD7Q5XG87 772 aaKnown RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PDPK2PQ6A1A2 396 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC9A4Q6AI14 798 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ARMC6Q6NXE6 501 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MFSD7Q6UXD7 560 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 WASH2PQ6VEQ5 465 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NAPRTQ6XQN6 538 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPOCD1Q6ZMY3 1216 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SHISA6Q6ZSJ9 500 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CDHR3Q6ZTQ4 885 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CUZD1Q86UP6 607 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZC3H18Q86VM9 953 aaKnown RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TAX1BP1Q86VP1 789 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LRRC49Q8IUZ0 686 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DSELQ8IZU8 1212 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CTNNBL1Q8WYA6 563 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CPT1BQ92523 772 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PNPLA2Q96AD5 504 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MRGPRX2Q96LB1 330 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 VPS35Q96QK1 796 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FICDQ9BVA6 458 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GPR87Q9BY21 358 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC29A3Q9BZD2 475 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZCCHC2Q9C0B9 1178 aaKnown RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ILKAPQ9H0C8 392 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KIR3DX1Q9H7L2 352 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KCND1Q9NSA2 647 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HAUS2Q9NVX0 235 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SEMA5BQ9P283 1151 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KLHL8Q9P2G9 620 aaPredicted RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DHCR7Q9UBM7 475 aaKnown RBP5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AMACRQ9UHK6 382 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TFR2Q9UP52 801 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BTRCQ9Y297 605 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KLHL20Q9Y2M5 609 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF451Q9Y4E5 1061 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PDZD2O15018 2839 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HIVEP1P15822 2718 aa5.82□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KRT87PA6NCN2 255 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 WIPF3A6NGB9 483 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C9J4A7 227 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 E2F3O00716 465 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF749O43361 778 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZG16O60844 167 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KRT38O76015 456 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AGTP01019 485 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CBSLP0DN79 551 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MSH3P20585 1137 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LPOP22079 712 aaPredicted RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CES1P23141 567 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PDHA2P29803 388 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CBSP35520 551 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CDKN1CP49918 316 aaPredicted RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FANCCQ00597 558 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DMPKQ09013 629 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KRT33BQ14525 404 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NR1I3Q14994 352 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IQCB1Q15051 598 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BRD3Q15059 726 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PDK1Q15118 436 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC1A5Q15758 541 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 VWA5B1Q5TIE3 1220 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MLIPQ5VWP3 458 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C1QL3Q5VWW1 255 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF385CQ66K41 422 aaPredicted RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KLHL35Q6PF15 583 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PPP1R32Q7Z5V6 425 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MAP7D3Q8IWC1 876 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RBM12BQ8IXT5 1001 aaKnown RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IQCKQ8N0W5 287 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF567Q8N184 647 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TAB3Q8N5C8 712 aaPredicted RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PHC3Q8NDX5 983 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR4K2Q8NGD2 314 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR52E1Q8NGJ3 308 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR13C4Q8NGS5 318 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 UBE2Q2Q8WVN8 375 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LCN9Q8WX39 176 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms