RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 DNAJB1P25685 340 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ADARB1P78563 741 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 TAB1Q15750 504 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 CNTN4Q8IWV2 1026 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ZBED3Q96IU2 234 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 UBXN10Q96LJ8 280 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ULK1O75385 1050 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 C7P10643 843 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 HRH2P25021 359 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 PSMD8P48556 350 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 MTA1Q13330 715 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 INAVAQ3KP66 663 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 LIX1Q8N485 282 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 CDKN2AIPNLQ96HQ2 116 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 SEPT5Q99719 369 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 REEP1Q9H902 201 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 PAK1IP1Q9NWT1 392 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 VAPAQ9P0L0 249 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 DYTNA2CJ06 578 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 OR1I1O60431 355 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 KERAO60938 352 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 PKMP14618 531 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 MC4RP32245 332 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 CYP2C18P33260 490 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ACVRL1P37023 503 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 DGKEP52429 567 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 CDC42EP1Q00587 391 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 SCAPQ12770 1279 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 TIGD5Q53EQ6 642 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ALFQ53S48 1182 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 UBE2UQ5VVX9 321 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 L3HYPDHQ96EM0 354 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 KCNS3Q9BQ31 491 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 RNF38Q9H0F5 515 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 ABCD2Q9UBJ2 740 aa13.65□□□□□ -0.22
UBE2D3-210ENST00000453744 SOCS7O14512 581 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 PRMT5O14744 637 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 RCAN2Q14206 197 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 KRTCAP2Q8N6L1 136 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 OR5K1Q8NHB7 308 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 SERPINB11Q96P15 392 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 AARSD1Q9BTE6 412 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 PRRG3Q9BZD7 231 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 GPN2Q9H9Y4 310 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 IKZF3Q9UKT9 509 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 PTCH2Q9Y6C5 1203 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 A0A1W2PQ67 120 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 EEDO75530 441 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CASP9P55211 416 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 EMX2Q04743 252 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 OXA1LQ15070 435 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 KANK2Q63ZY3 851 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 ATP6V0D2Q8N8Y2 350 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 OR52J3Q8NH60 311 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 DACT3Q96B18 629 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CITED4Q96RK1 184 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 TDRD1Q9BXT4 1180 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 MROQ9BYG7 248 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 FKBPLQ9UIM3 349 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 ERVK-11Q9UQG0 969 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 RGS14O43566 566 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 MATN4O95460 622 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 PHC1P78364 1004 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 PWP1Q13610 501 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 MED22Q15528 200 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CDCA5Q96FF9 252 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 C14orf119Q9NWQ9 140 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 ACTL7AQ9Y615 435 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 ZFC3H1O60293 1989 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CENPXA8MT69 81 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 MMP3P08254 477 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CHRM5P08912 532 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 IRF1P10914 325 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 SMPD1P17405 629 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CTU2Q2VPK5 515 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 RFTN2Q52LD8 501 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 BRMS1LQ5PSV4 323 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 OR4F6Q8NGB9 312 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 FBXO32Q969P5 355 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 MAF1Q9H063 256 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 CLPBQ9H078 707 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 OPTCQ9UBM4 332 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 ZNF451Q9Y4E5 1061 aa13.64□□□□□ -0.23
UBE2D3-210ENST00000453744 LOC110117498-PIK3R3F6TDL0 507 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 RGS4P49798 205 aa13.63□□□□□ -0.23
UBE2D3-210ENST00000453744 TP53BP2Q13625 1128 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms