RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ABCG1P45844 678 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 POU4F1Q01851 419 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 USP10Q14694 798 aaKnown RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 LRRC36Q1X8D7 754 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 CNSTQ6PJW8 725 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 TRIM67Q6ZTA4 783 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 SERPINA9Q86WD7 417 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 ERI1Q8IV48 349 aaKnown RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 C10orf107Q8IVU9 208 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 PIANPQ8IYJ0 282 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 PGAM4Q8N0Y7 254 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 TRAM1L1Q8N609 369 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 KYQ8NBH2 561 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 OR14C36Q8NHC7 312 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 HMGB4Q8WW32 186 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 CCDC124Q96CT7 223 aaKnown RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 AP2M1Q96CW1 435 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 DTD2Q96FN9 168 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 ABCG8Q9H221 673 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 PNPOQ9NVS9 261 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 SERGEFQ9UGK8 458 aa15.61■□□□□ 0.09
SNX17-204ENST00000453453 MTF2Q9Y483 593 aaPredicted RBP15.61■□□□□ 0.09
SNX17-204ENST00000453453 TRBV5-4A0A0C4DH59 114 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 PLRG1O43660 514 aaKnown RBP15.6■□□□□ 0.09
SNX17-204ENST00000453453 RECQL5O94762 991 aaPredicted RBP15.6■□□□□ 0.09
SNX17-204ENST00000453453 OR6B1O95007 311 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 PGM3O95394 542 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 ZNF7P17097 686 aaPredicted RBP15.6■□□□□ 0.09
SNX17-204ENST00000453453 GABRG2P18507 467 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 NCF2P19878 526 aaPredicted RBP15.6■□□□□ 0.09
SNX17-204ENST00000453453 TUBA4AP68366 448 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 MYBPC1Q00872 1141 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 SETMARQ53H47 684 aaPredicted RBP15.6■□□□□ 0.09
SNX17-204ENST00000453453 PIGGQ5H8A4 983 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 KIAA1161Q6NSJ0 714 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 FAM45BPQ6NSW5 357 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 RFLNAQ6ZTI6 216 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 RBFAQ8N0V3 343 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 NXPE1Q8N323 547 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 METTL25Q8N6Q8 603 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 TSTD1Q8NFU3 115 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 FAM45AQ8TCE6 357 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 LPGAT1Q92604 370 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 FAM131CQ96AQ9 280 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 RIOK2Q9BVS4 552 aaKnown RBP15.6■□□□□ 0.09
SNX17-204ENST00000453453 UBAP1Q9NZ09 502 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 VTI1BQ9UEU0 232 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 CRYL1Q9Y2S2 319 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 COMMD10Q9Y6G5 202 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 PLXNB3Q9ULL4 1909 aa15.6■□□□□ 0.09
SNX17-204ENST00000453453 PRUNE2Q8WUY3 3088 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 A0A0J9YVX5 310 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 PFDN1O60925 122 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 BCAS2O75934 225 aaPredicted RBP15.59■□□□□ 0.09
SNX17-204ENST00000453453 CDK4P11802 303 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 STMN1P16949 149 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ZNF23P17027 643 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 UGT1A6P19224 532 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 SAT1P21673 171 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 UGT1A1P22309 533 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 UGT1A4P22310 534 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ACRV1P26436 265 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 UGT1A3P35503 534 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 UGT1A5P35504 534 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 CDKN1CP49918 316 aaPredicted RBP15.59■□□□□ 0.09
SNX17-204ENST00000453453 INHBCP55103 352 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 TAS2R38P59533 333 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 RPS21P63220 83 aaKnown RBP15.59■□□□□ 0.09
SNX17-204ENST00000453453 TXNL4AP83876 142 aaKnown RBP15.59■□□□□ 0.09
SNX17-204ENST00000453453 FLOT2Q14254 428 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ZNF423Q2M1K9 1284 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ATP13A5Q4VNC0 1218 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ZNF789Q5FWF6 425 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 TCHHL1Q5QJ38 904 aaPredicted RBP15.59■□□□□ 0.09
SNX17-204ENST00000453453 HENMT1Q5T8I9 393 aaKnown RBP15.59■□□□□ 0.09
SNX17-204ENST00000453453 C16orf46Q6P387 395 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 PJA1Q8NG27 643 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 GAB3Q8WWW8 586 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 SCAMP4Q969E2 229 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 CLPBQ9H078 707 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ZNF385DQ9H6B1 395 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 SNX15Q9NRS6 342 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ZDHHC3Q9NYG2 299 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 ZNHIT2Q9UHR6 403 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 TLK1Q9UKI8 766 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 COQ6Q9Y2Z9 468 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 PCDHB1Q9Y5F3 818 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 AK5Q9Y6K8 562 aa15.59■□□□□ 0.09
SNX17-204ENST00000453453 AGAP14A8MT82 685 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 ZNF701M0R085 212 aaPredicted RBP15.58■□□□□ 0.09
SNX17-204ENST00000453453 HNRNPRO43390 633 aaKnown RBP15.58■□□□□ 0.09
SNX17-204ENST00000453453 DCXO43602 365 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 TRMUO75648 421 aaKnown RBP15.58■□□□□ 0.09
SNX17-204ENST00000453453 HSPA4LO95757 839 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 KCNA4P22459 653 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 PIK3R1P27986 724 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 ALDH3B2P48448 385 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 CDK9P50750 372 aaKnown RBP15.58■□□□□ 0.09
SNX17-204ENST00000453453 ADPRHP54922 357 aa15.58■□□□□ 0.09
SNX17-204ENST00000453453 ZXDAP98168 799 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms