RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 RNF187Q5TA31 235 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 NKAIN2Q5VXU1 208 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 TMPRSS9Q7Z410 1059 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 CILP2Q8IUL8 1156 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 IGDCC3Q8IVU1 814 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 SPACA3Q8IXA5 215 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 LMNTD2Q8IXW0 634 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 SPDYE1Q8NFV5 336 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 LRRC39Q96DD0 335 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 AHCYL2Q96HN2 611 aaKnown RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 RMDN2Q96LZ7 410 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 C12orf66Q96MD2 445 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 ZNF578Q96N58 590 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 PWWP2AQ96N64 755 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 TMEM74Q96NL1 305 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 DPYSL5Q9BPU6 564 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 TSSK1BQ9BXA7 367 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 TBC1D10AQ9BXI6 508 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 OR52A5Q9H2C5 316 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 DPH5Q9H2P9 285 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 EPB41L1Q9H4G0 881 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 POLR1BQ9H9Y6 1135 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 C20orf96Q9NUD7 363 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 IL1RAPL1Q9NZN1 696 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 UTP11Q9Y3A2 253 aaKnown RBP19.49■□□□□ 0.71
COL9A3-202ENST00000452372 MRFAP1Q9Y605 127 aa19.49■□□□□ 0.71
COL9A3-202ENST00000452372 DUX1O43812 170 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 PDHA2P29803 388 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 CCKBRP32239 447 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 CD151P48509 253 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 INHBCP55103 352 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 GABREP78334 506 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 PLOD1Q02809 727 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-202ENST00000452372 CFHR1Q03591 330 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 ZFP36L1Q07352 338 aaKnown RBP19.48■□□□□ 0.71
COL9A3-202ENST00000452372 CRYMQ14894 314 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 MAP9Q49MG5 647 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 SPANXN3Q5MJ09 141 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 ZNF574Q6ZN55 896 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-202ENST00000452372 CENPUQ71F23 418 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 B3GNT8Q7Z7M8 397 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 SLITRK4Q8IW52 837 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 ZFPM2Q8WW38 1151 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 LPGAT1Q92604 370 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 ATXN7L3BQ96GX2 97 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 NUDT22Q9BRQ3 303 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 FOXP3Q9BZS1 431 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 RAB17Q9H0T7 212 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 EPB41L5Q9HCM4 733 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 IMP3Q9NV31 184 aaKnown RBP19.48■□□□□ 0.71
COL9A3-202ENST00000452372 GNPTGQ9UJJ9 305 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 VPS9D1Q9Y2B5 631 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 TEX264Q9Y6I9 313 aa19.48■□□□□ 0.71
COL9A3-202ENST00000452372 UBA6A0AVT1 1052 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-202ENST00000452372 SLC5A10A0PJK1 596 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 PMS2P1A4D2B8 440 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 E7ESA3 106 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 S1PR4O95977 384 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 ELK3P41970 407 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 PREPP48147 710 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 ADARP55265 1226 aaKnown RBP19.47■□□□□ 0.71
COL9A3-202ENST00000452372 GPR18Q14330 331 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 PTRHD1Q6GMV3 140 aaKnown RBP19.47■□□□□ 0.71
COL9A3-202ENST00000452372 TMEM71Q6P5X7 295 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 IGF2-ASQ6U949 168 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 MNS1Q8NEH6 495 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 OR4D9Q8NGE8 314 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 CALML6Q8TD86 181 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 LIN37Q96GY3 246 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-202ENST00000452372 BIRC8Q96P09 236 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 STRADBQ9C0K7 418 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 INTS10Q9NVR2 710 aaKnown RBP19.47■□□□□ 0.71
COL9A3-202ENST00000452372 GRHL1Q9NZI5 618 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 HEBP2Q9Y5Z4 205 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 CFAP20Q9Y6A4 193 aaKnown RBP19.47■□□□□ 0.71
COL9A3-202ENST00000452372 COLEC10Q9Y6Z7 277 aa19.47■□□□□ 0.71
COL9A3-202ENST00000452372 AHCTF1Q8WYP5 2266 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 IQCF5A8MTL0 148 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 IFRD1O00458 451 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-202ENST00000452372 NDUFS1P28331 727 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 CCR7P32248 378 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 CSF2RBP32927 897 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 LIMK2P53671 638 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 EIF3BP55884 814 aaKnown RBP19.46■□□□□ 0.71
COL9A3-202ENST00000452372 ERVPABLB-1P60509 514 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 CTBP1Q13363 440 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 HSP90AA5PQ58FG0 334 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 HP1BP3Q5SSJ5 553 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-202ENST00000452372 ZNF470Q6ECI4 717 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 WDR74Q6RFH5 385 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-202ENST00000452372 KCNMB4Q86W47 210 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 DENND6AQ8IWF6 608 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 UNC5BQ8IZJ1 945 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 LSMEM2Q8N112 164 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 ASZ1Q8WWH4 475 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 SLC46A1Q96NT5 459 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 PANX3Q96QZ0 392 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 UBL7Q96S82 380 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-202ENST00000452372 WDR83Q9BRX9 315 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms