RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 C17orf53Q8N3J3 647 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 LKAAEAR1Q8TD35 194 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 JPH3Q8WXH2 748 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 BIRC8Q96P09 236 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 DCBLD2Q96PD2 775 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 TAAR9Q96RI9 348 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 NRTNQ99748 197 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 CARD6Q9BX69 1037 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 XAB2Q9HCS7 855 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 FBXO8Q9NRD0 319 aa15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 IMP3Q9NV31 184 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-205ENST00000452128 ADAMTS20P59510 1910 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 GOLGA6L10A0A0M3HER8 536 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 MAGEB16A2A368 324 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 SDR42E2A6NKP2 422 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 AGRPO00253 132 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 QSOX1O00391 747 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 LIN7AO14910 233 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 RRP8O43159 456 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 VAPBO95292 243 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 SLC35G4P0C7Q5 338 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 AMD1P17707 334 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 RPS3P23396 243 aaKnown RBP eCLIP15.7■□□□□ 0.12e-7■□□□□ 10.7
SCAMP4-205ENST00000452128 MAPK9P45984 424 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 CBLBQ13191 982 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 ANKRD20A4Q4UJ75 823 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 FASTKD1Q53R41 847 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 KIAA0930Q6ICG6 404 aaPredicted RBP15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 PDZD3Q86UT5 571 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 PHC3Q8NDX5 983 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 GRK7Q8WTQ7 553 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 SLC41A2Q96JW4 573 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 DDA1Q9BW61 102 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 ZNF768Q9H5H4 540 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 VPS37BQ9H9H4 285 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 PLAC1Q9HBJ0 212 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 CATSPERZQ9NTU4 200 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 B3GALT1Q9Y5Z6 326 aa15.7■□□□□ 0.1
SCAMP4-205ENST00000452128 CTAGE9A4FU28 777 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 OR5K3A6NET4 321 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 IQCF5A8MTL0 148 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 A8MU76 341 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 PRMT5O14744 637 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 SLCO2B1O94956 709 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 FTH1P02794 183 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 AOAHP28039 575 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 NDUFS1P28331 727 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 CSTF2P33240 577 aaKnown RBP eCLIP15.69■□□□□ 0.16e-8■□□□□ 9.6
SCAMP4-205ENST00000452128 TTPAP49638 278 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 TERF1P54274 439 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 ADARP55265 1226 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 SARNPP82979 210 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 TGIF1Q15583 401 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 NAPRTQ6XQN6 538 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 CENPUQ71F23 418 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 VRK3Q8IV63 474 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 LPGAT1Q92604 370 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 TFGQ92734 400 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 ART4Q93070 314 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 NAF1Q96HR8 494 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 TGM7Q96PF1 710 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 TFB2MQ9H5Q4 396 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 MVB12BQ9H7P6 319 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 RNF14Q9UBS8 474 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 FAM8A1Q9UBU6 413 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 HEBP2Q9Y5Z4 205 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 COLEC10Q9Y6Z7 277 aa15.69■□□□□ 0.1
SCAMP4-205ENST00000452128 CACNA1GO43497 2377 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 IGHV5-51A0A0C4DH38 117 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 EFCAB7A8K855 629 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 GOLGA8MH3BSY2 632 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 DNALI1O14645 258 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 S1PR4O95977 384 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 OR56A5P0C7T3 313 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 CD82P27701 267 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 ABCG1P45844 678 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 MAPK10P53779 464 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 PLOD1Q02809 727 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 GBX1Q14549 363 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 MSS51Q4VC12 460 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 AARS2Q5JTZ9 985 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 CTSL3PQ5NE16 218 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 SNAP47Q5SQN1 464 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 ZFAND4Q86XD8 727 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 ACVR1CQ8NER5 493 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 KCNE4Q8WWG9 221 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 ELMO1Q92556 727 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 ZDHHC12Q96GR4 267 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 CAPZA3Q96KX2 299 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 TCF12Q99081 682 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 TTC1Q99614 292 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 SLC39A1Q9NY26 324 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 AKAP7Q9P0M2 348 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 LHX6Q9UPM6 363 aa15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 SMG1Q96Q15 3661 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-205ENST00000452128 GOLGA8KD6RF30 607 aa15.67■□□□□ 0.1
SCAMP4-205ENST00000452128 GOLGA8TH3BQL2 631 aa15.67■□□□□ 0.1
SCAMP4-205ENST00000452128 KLK10O43240 276 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms