RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 AUP1Q9Y679 476 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 STYXL1Q9Y6J8 313 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MYO18AQ92614 2054 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 CCDC182A6NF36 153 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 GNGT2O14610 69 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 DFNA5O60443 496 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 IPO13O94829 963 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 CDK14O94921 469 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 MATN4O95460 622 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PGK1P00558 417 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 CST1P01037 141 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 C1QBP02746 253 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 IFNA16P05015 189 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ADORA3P0DMS8 318 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 ZNF250P15622 560 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 CA5AP35218 305 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ASPAP45381 313 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 OR4D2P58180 307 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 CXCR4P61073 352 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ZNF33BQ06732 778 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 GARNL3Q5VVW2 1013 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 TIGD3Q6B0B8 471 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 SLC26A9Q7LBE3 791 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 HDDC2Q7Z4H3 204 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 DNAAF3Q8N9W5 541 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ST13P5Q8NFI4 369 aaPredicted RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 FRS2Q8WU20 508 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 TESCQ96BS2 214 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 CCDC126Q96EE4 140 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PDLIM5Q96HC4 596 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 ITCHQ96J02 903 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PIWIL1Q96J94 861 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 ZBTB45Q96K62 511 aaPredicted RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 ACOX2Q99424 681 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PRKD2Q9BZL6 878 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 SLC23A1Q9UHI7 598 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 TCEAL9Q9UHQ7 104 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 KLHL21Q9UJP4 597 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 FBXO10Q9UK96 956 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 HSPB11Q9Y547 144 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PCDHB14Q9Y5E9 798 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PCDHGB7Q9Y5F8 929 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ORC6Q9Y5N6 252 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 A0A1W2PP18 115 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 A8MT66 165 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 HACD1B0YJ81 288 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 H0YCG3 227 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PI15O43692 258 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ACSL4O60488 711 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 MRPS14O60783 128 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 FAM20BO75063 409 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ATG13O75143 517 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 KCNA5P22460 613 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 MYL9P24844 172 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PIK3CBP42338 1070 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 PPP3CCP48454 512 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 KPNA2P52292 529 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 ORC1Q13415 861 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 GRAPQ13588 217 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 RPS6KA2Q15349 733 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 SEZ6Q53EL9 994 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 ZBTB37Q5TC79 503 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 SYVN1Q86TM6 617 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 CEP97Q8IW35 865 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 FNDC5Q8NAU1 212 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 GRAPLQ8TC17 118 aaPredicted RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 BBS2Q9BXC9 721 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 TNKS2Q9H2K2 1166 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 IFT22Q9H7X7 185 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 AGO4Q9HCK5 861 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 SLC52A3Q9NQ40 469 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 SDR39U1Q9NRG7 319 aaPredicted RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 ZNF277Q9NRM2 450 aaPredicted RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 TMEM39AQ9NV64 488 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 NSMCE4AQ9NXX6 385 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 AASSQ9UDR5 926 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 GIMAP2Q9UG22 337 aa8.49□□□□□ -1.05
LSM5-208ENST00000450169 AGO1Q9UL18 857 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 DIMT1Q9UNQ2 313 aaKnown RBP8.49□□□□□ -1.05
LSM5-208ENST00000450169 LOC100506127A0A0U1RQW1 187 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 TYW5A2RUC4 315 aaKnown RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 M0QYV0 167 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 UBFD1O14562 309 aaKnown RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 ALPPP05187 535 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 RPLP0P05388 317 aaKnown RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 NR3C2P08235 984 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 TNNI3P19429 210 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 CYP3A5P20815 502 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 PRKACGP22612 351 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 SOX6P35712 828 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 CASP2P42575 452 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 PLK1P53350 603 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 TEKQ02763 1124 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 IFRD2Q12894 506 aaPredicted RBP8.48□□□□□ -1.05
LSM5-208ENST00000450169 LAPTM5Q13571 262 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 IRF3Q14653 427 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 ZNF699Q32M78 642 aa8.48□□□□□ -1.05
LSM5-208ENST00000450169 RFX4Q33E94 735 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms