RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NRTNQ99748 197 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 IL22Q9GZX6 179 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 TWSG1Q9GZX9 223 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 ZNF768Q9H5H4 540 aaKnown RBP13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 FAM8A1Q9UBU6 413 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 SNX12Q9UMY4 172 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 ZNF462Q96JM2 2506 aa13.72□□□□□ -0.21
RTFDC1-204ENST00000449062 IGHV5-51A0A0C4DH38 117 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 TEX51A0A1B0GUA7 166 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 OR5K3A6NET4 321 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 AP3B1O00203 1094 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 ZNF185O15231 689 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 AVILO75366 819 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 TPBGLP0DKB5 382 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 NELFEP18615 380 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 NMBRP28336 390 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 PREPP48147 710 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 ARCN1P48444 511 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 RAB15P59190 212 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 GPS1Q13098 491 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 BOP1Q14137 746 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 DCAF12Q5T6F0 453 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 ARHGAP40Q5TG30 622 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 LYPLAL1Q5VWZ2 237 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 TIPARPQ7Z3E1 657 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 FAM129CQ86XR2 697 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 PHC3Q8NDX5 983 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 OR6P1Q8NGX9 317 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 TEFMQ96QE5 360 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 CTRCQ99895 268 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 TFB2MQ9H5Q4 396 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 HRASLS2Q9NWW9 162 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 COLEC10Q9Y6Z7 277 aa13.71□□□□□ -0.21
RTFDC1-204ENST00000449062 STMND1H3BQB6 276 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 PGRMC1O00264 195 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 QSOX1O00391 747 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 LIN7AO14910 233 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 KIF5CO60282 957 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 MGAT1P26572 445 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 NDUFS1P28331 727 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 CCR7P32248 378 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 SH3BP2P78314 561 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 CACHD1Q5VU97 1274 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 ARMC3Q5W041 872 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 KLHL35Q6PF15 583 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 CCDC137Q6PK04 289 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 CCDC81Q6ZN84 652 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 FAM92BQ6ZTR7 304 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 LDB1Q86U70 411 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 MCUQ8NE86 351 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 PPHLN1Q8NEY8 458 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 TFGQ92734 400 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 MFSD3Q96ES6 412 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 NAP1L3Q99457 506 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 ZPBPQ9BS86 351 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 CARD6Q9BX69 1037 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 MVB12BQ9H7P6 319 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 SYBUQ9NX95 663 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 TMEM184BQ9Y519 407 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 HEBP2Q9Y5Z4 205 aa13.7□□□□□ -0.22
RTFDC1-204ENST00000449062 SPTBP11277 2137 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 COL6A6A6NMZ7 2263 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 OR6C74A6NCV1 312 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 POLR1CO15160 346 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 FANCGO15287 622 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 CD3EAPO15446 510 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 GPC4O75487 556 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 TMEM63AO94886 807 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 DLGAP3O95886 979 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 MLNP12872 115 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 MAGEA3P43357 314 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 PPM1FP49593 454 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 VPS41P49754 854 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 SEPHS1P49903 392 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 PRAMEP78395 509 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 GSE1Q14687 1217 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 IRGCQ6NXR0 463 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 CES3Q6UWW8 571 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 CEACAM20Q6UY09 585 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 NAPRTQ6XQN6 538 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 VASH2Q86V25 355 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 AGGF1Q8N302 714 aaeCLIP13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 MPP5Q8N3R9 675 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 LSM14AQ8ND56 463 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 ACVR1CQ8NER5 493 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 OR4E2Q8NGC2 313 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 UBXN4Q92575 508 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 TTC9Q92623 222 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 FERD3LQ96RJ6 166 aa13.69□□□□□ -0.22
RTFDC1-204ENST00000449062 UBL7Q96S82 380 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms