RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CNTNAP3Q9BZ76 1288 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 DPY30Q9C005 99 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLHL25Q9H0H3 589 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 GANQ9H2C0 597 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TIGARQ9NQ88 270 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TRPM6Q9BX84 2022 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CADP27708 2225 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM234BA2RU67 622 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PIGNO95427 931 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC34A2O95436 690 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ENO3P13929 434 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 EEF1DP29692 281 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 GRIA4P48058 902 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRP8Q14114 963 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 STK11Q15831 433 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM198Q66K66 360 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LCTLQ6UWM7 567 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 B3GNT9Q6UX72 402 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CRELD2Q6UXH1 353 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 C1orf74Q96LT6 269 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNJ16Q9NPI9 418 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPATS2LQ9NUQ6 558 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 POLG2Q9UHN1 485 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM98Q9Y2Y6 226 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 COQ6Q9Y2Z9 468 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 A0A087WUV0 522 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 MASP2O00187 686 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 FSCN2O14926 492 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CRYABP02511 175 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 FHP07954 510 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 RBP1P09455 135 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 MSL3P1P0C860 447 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PKMP14618 531 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ARHGDIAP52565 204 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMPPEQ6ZT21 453 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LYSMD3Q7Z3D4 306 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKS4BQ8N8V4 417 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 MYRIPQ8NFW9 859 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 OR4L1Q8NH43 312 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC8CQ8TDW0 803 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PPP1R14BQ96C90 147 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 MRPL46Q9H2W6 279 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 NEU2Q9Y3R4 380 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDHB1Q9Y5F3 818 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 C2CD4BA6NLJ0 364 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PPP1R37O75864 691 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CYP1A1P04798 512 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 JAK1P23458 1154 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PSMB4P28070 264 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PLP2Q04941 152 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC5A9Q2M3M2 681 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC74BQ6ZQY2 392 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 RELTQ969Z4 430 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SGF29Q96ES7 293 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 EPB41L1Q9H4G0 881 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 MTG2Q9H4K7 406 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SDHAF3Q9NRP4 125 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 OSER1Q9NX31 292 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACOT9Q9Y305 439 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCNJ13O60928 360 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ITGB7P26010 798 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 WLSQ5T9L3 541 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LILRA6Q6PI73 481 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 RBM12BQ8IXT5 1001 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TSEN2Q8NCE0 465 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 UBE2FQ969M7 185 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 IGSF8Q969P0 613 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 UTP23Q9BRU9 249 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLHL4Q9C0H6 718 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRMDAQ9H2I8 198 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 C3orf14Q9HBI5 128 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 OPTCQ9UBM4 332 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CFAP20Q9Y6A4 193 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM191CA6NGB0 347 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 C2orf74A8MZ97 194 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 BTN3A1O00481 513 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 COL6A2P12110 1019 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ICAM2P13598 275 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CHRNB4P30926 498 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SSR2P43308 183 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 GDI2P50395 445 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SRP54P61011 504 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACTG1P63261 375 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 ATG16L1Q676U5 607 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 C11orf63Q6NUN7 778 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 NYAP1Q6ZVC0 841 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CHSY3Q70JA7 882 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 LINC01465Q8N7H1 131 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMIEQ8NEW7 156 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 KBTBD7Q8WVZ9 684 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 EXTL1Q92935 676 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PPWD1Q96BP3 646 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 DGAT2Q96PD7 388 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM237Q96Q45 408 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SEMA6CQ9H3T2 930 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCDC177Q9NQR7 707 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 MFHAS1Q9Y4C4 1052 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDHGA8Q9Y5G5 932 aa5.54□□□□□ -1.52
CDC42BPA-209ENST00000448940 SPTAN1Q13813 2472 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms