RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TMEM52BQ4KMG9 183 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 CYHR1Q6ZMK1 362 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 RFLNAQ6ZTI6 216 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 LARP4Q71RC2 724 aaKnown RBP eCLIP10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 ERN2Q76MJ5 926 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 NLRP8Q86W28 1048 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 PHYKPLQ8IUZ5 450 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 DDIASQ8IXT1 998 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 POU5F2Q8N7G0 328 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 ASZ1Q8WWH4 475 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 SCAMP4Q969E2 229 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 GLYATL1Q969I3 302 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 DTD2Q96FN9 168 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 HIST1H2AHQ96KK5 128 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 COQ10AQ96MF6 247 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 NSUN5Q96P11 429 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 MYADMQ96S97 322 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 FAM129BQ96TA1 746 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 HIST1H2AJQ99878 128 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 H2AFJQ9BTM1 129 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 HDAC8Q9BY41 377 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 ABCG8Q9H221 673 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 EFCAB1Q9HAE3 211 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 TNFRSF12AQ9NP84 129 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 RIC8BQ9NVN3 520 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 WWOXQ9NZC7 414 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 EIF2B4Q9UI10 523 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 ANGPTL3Q9Y5C1 460 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 COPG1Q9Y678 874 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 DOCK8Q8NF50 2099 aa10.38□□□□□ -0.75
VIPAS39-203ENST00000448935 LOC100653049A0A140TA62 436 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 AREL1O15033 823 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CHUKO15111 745 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 RNASEH1O60930 286 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 ATG13O75143 517 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 KATNA1O75449 491 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 KRT34O76011 436 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 EPHX1P07099 455 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 GSTM1P09488 218 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 ADRB3P13945 408 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 LBPP18428 481 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CYP2A7P20853 494 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CPOXP36551 454 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 ACADVLP49748 655 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 AGTR2P50052 363 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 HNMTP50135 292 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CCR3P51677 355 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CREB5Q02930 508 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 GSTM4Q03013 218 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 GTF2H2Q13888 395 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 TRMT5Q32P41 509 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 GTF2H2CQ6P1K8 395 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 SPATA19Q7Z5L4 167 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 NET1Q7Z628 596 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 SNX32Q86XE0 403 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 TDHQ8IZJ6 230 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 KYQ8NBH2 561 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CXorf40AQ8TE69 158 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 ATP6V1E2Q96A05 226 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 ARRDC3Q96B67 414 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 NUS1Q96E22 293 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 FAM161BQ96MY7 647 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 NECTIN4Q96NY8 510 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 SERPINI1Q99574 410 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 THTPAQ9BU02 230 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 CD244Q9BZW8 370 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 S1PR5Q9H228 398 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 PARVBQ9HBI1 364 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 OPTCQ9UBM4 332 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 SARDHQ9UL12 918 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 TMPRSS11EQ9UL52 423 aa10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 PRPF19Q9UMS4 504 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 G3BP2Q9UN86 482 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 TCF20Q9UGU0 1960 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-203ENST00000448935 A8MUI8 341 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 FADS2P1A8MWK0 482 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 K7EPI3 171 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PSMD12O00232 456 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PIP5K1BO14986 540 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 IL12RB1P42701 662 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 TNFRSF4P43489 277 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 RPIAP49247 311 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 AP1S2P56377 157 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 DPTQ07507 201 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 HSPA14Q0VDF9 509 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 MESP2Q0VG99 397 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 GRIK2Q13002 908 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ART3Q13508 389 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 FASTKQ14296 549 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 GSTA3Q16772 222 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 POM121L1PQ3SYA9 428 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SYTL3Q4VX76 610 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 TMEM198Q66K66 360 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 OGFOD2Q6N063 350 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 UBE2R2Q712K3 238 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 DET1Q7L5Y6 550 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 GOLGA7Q7Z5G4 137 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SYVN1Q86TM6 617 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms