RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 POLBP06746 335 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 AGXTP21549 392 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 DCTP40126 519 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 CHRNA4P43681 627 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 ATP1A4Q13733 1029 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 NR6A1Q15406 480 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 KDELC1Q6UW63 502 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 OR1L3Q8NH93 324 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 LCN9Q8WX39 176 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 SNRNP40Q96DI7 357 aaKnown RBP23.7■■□□□ 1.38
PMS1-214ENST00000446877 DPH2Q9BQC3 489 aaPredicted RBP23.7■■□□□ 1.38
PMS1-214ENST00000446877 ERRFI1Q9UJM3 462 aaPredicted RBP23.7■■□□□ 1.38
PMS1-214ENST00000446877 CRYBG3Q68DQ2 2970 aa23.7■■□□□ 1.38
PMS1-214ENST00000446877 SHANK1Q9Y566 2161 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 GSAPA4D1B5 854 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 WIPF3A6NGB9 483 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 NFKB1P19838 968 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 CD68P34810 354 aaPredicted RBP23.69■■□□□ 1.38
PMS1-214ENST00000446877 CA5AP35218 305 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 ELOAQ14241 798 aaKnown RBP23.69■■□□□ 1.38
PMS1-214ENST00000446877 IQCB1Q15051 598 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 NCF4Q15080 339 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 PRKD1Q15139 912 aaPredicted RBP23.69■■□□□ 1.38
PMS1-214ENST00000446877 SLC1A5Q15758 541 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 SLC18A3Q16572 532 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 PLEKHN1Q494U1 663 aaPredicted RBP23.69■■□□□ 1.38
PMS1-214ENST00000446877 VWA5B1Q5TIE3 1220 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 FAM198BQ6UWH4 519 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 CFAP206Q8IYR0 622 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 CISD2Q8N5K1 135 aaKnown RBP23.69■■□□□ 1.38
PMS1-214ENST00000446877 IPMKQ8NFU5 416 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 C5orf34Q96MH7 638 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 CCM2Q9BSQ5 444 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 SRMSQ9H3Y6 488 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 KLHL8Q9P2G9 620 aaPredicted RBP23.69■■□□□ 1.38
PMS1-214ENST00000446877 SLC5A6Q9Y289 635 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 MED13Q9UHV7 2174 aa23.69■■□□□ 1.38
PMS1-214ENST00000446877 KLHL41O60662 606 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 CBX6O95503 412 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 CLDN1O95832 211 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 LDLRP01130 860 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 ALPPP05187 535 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 CAPN1P07384 714 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 HBQ1P09105 142 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 TMEM253P0C7T8 217 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 OTX2P32243 289 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 ARHGAP25P42331 645 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 PTCHD3Q3KNS1 767 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 LRRC38Q5VT99 294 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 ACVR1CQ8NER5 493 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 SLC35G2Q8TBE7 412 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 DCUN1D1Q96GG9 259 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 TCTN2Q96GX1 697 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 MRGPRX2Q96LB1 330 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 IP6K3Q96PC2 410 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 ANP32EQ9BTT0 268 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 DHRS4Q9BTZ2 278 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 DEF6Q9H4E7 631 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 DDX56Q9NY93 547 aaKnown RBP23.68■■□□□ 1.38
PMS1-214ENST00000446877 B3GNT3Q9Y2A9 372 aa23.68■■□□□ 1.38
PMS1-214ENST00000446877 E7EQ34 232 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 F5H423 210 aaPredicted RBP23.67■■□□□ 1.38
PMS1-214ENST00000446877 GAPDHSO14556 408 aaPredicted RBP23.67■■□□□ 1.38
PMS1-214ENST00000446877 PRAMEF1O95521 474 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 MSL3P1P0C860 447 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 TNNT1P13805 278 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 PRDX3P30048 256 aaKnown RBP23.67■■□□□ 1.38
PMS1-214ENST00000446877 WASHC5Q12768 1159 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 TFDP2Q14188 446 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 ZRANB3Q5FWF4 1079 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 LYPLAL1Q5VWZ2 237 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 PID1Q7Z2X4 250 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 RMDN2Q96LZ7 410 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 FER1L6-AS2Q96M78 137 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 C17orf62Q9BQA9 187 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 ASF1BQ9NVP2 202 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 SAE1Q9UBE0 346 aaPredicted RBP23.67■■□□□ 1.38
PMS1-214ENST00000446877 CACNA1DQ01668 2161 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 HIVEP3Q5T1R4 2406 aa23.67■■□□□ 1.38
PMS1-214ENST00000446877 ANKUB1A6NFN9 424 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 GYPCP04921 128 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 RALBP11234 206 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 MPP3Q13368 585 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 BCL7AQ4VC05 210 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 ZNF789Q5FWF6 425 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 CLEC1AQ8NC01 280 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 OXNAD1Q96HP4 312 aaPredicted RBP23.66■■□□□ 1.38
PMS1-214ENST00000446877 LINC00615Q96LM1 132 aaPredicted RBP23.66■■□□□ 1.38
PMS1-214ENST00000446877 FCRL5Q96RD9 977 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 FERD3LQ96RJ6 166 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 FSD1LQ9BXM9 530 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 ILKAPQ9H0C8 392 aaPredicted RBP23.66■■□□□ 1.38
PMS1-214ENST00000446877 ASB8Q9H765 288 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 LRBAP50851 2863 aa23.66■■□□□ 1.38
PMS1-214ENST00000446877 C2orf81A6NN90 581 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 PEX12O00623 359 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 ZNF749O43361 778 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 IGHEP01854 428 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 HADHAP40939 763 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 LMAN1P49257 510 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms