RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HDCP19113 662 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PCLAFQ15004 111 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PYROXD2Q8N2H3 581 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TRPM4Q8TD43 1214 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CHIAQ9BZP6 476 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ASB7Q9H672 318 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PIN4Q9Y237 131 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 F8A1P23610 371 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 HMGCS2P54868 508 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SMIM5Q71RC9 77 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ZDHHC21Q8IVQ6 265 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 MEIOBQ8N635 442 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 MTFMTQ96DP5 389 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 GON7Q9BXV9 100 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SPATA31A6Q5VVP1 1343 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PGM5Q15124 567 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 RABL3Q5HYI8 236 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 DSG4Q86SJ6 1040 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ZFP3Q96NJ6 502 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CLCA3PQ9Y6N3 262 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SLC22A5O76082 557 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CYP2C18P33260 490 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 GDI2P50395 445 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 CLCN3P51790 818 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SHROOM1Q2M3G4 852 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 CYBRD1Q53TN4 286 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ARSKQ6UWY0 536 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SNX20Q7Z614 316 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ADGRG5Q8IZF4 528 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 C12orf29Q8N999 325 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 GLB1L3Q8NCI6 653 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 LINC00116Q8NCU8 138 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SIMC1Q8NDZ2 872 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ATG4CQ96DT6 458 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SORT1Q99523 831 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ZNF70Q9UC06 446 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 SPIN1Q9Y657 262 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 ROS1P08922 2347 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 FADS2P1A8MWK0 482 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CFHP08603 1231 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PKLRP30613 574 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ANXA11P50995 505 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 C10orf53Q8N6V4 93 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 MFSD2AQ8NA29 543 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 LMO3Q8TAP4 145 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PMEPA1Q969W9 287 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SIGLEC10Q96LC7 697 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 C11orf16Q9NQ32 467 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ARL15Q9NXU5 204 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 GLS2Q9UI32 602 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 NENFQ9UMX5 172 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 MYH14Q7Z406 1995 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 SNRNP200O75643 2136 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 CLTBP09497 229 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PTX3P26022 381 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 NUFIP1Q9UHK0 495 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 FAM50BQ9Y247 325 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ATP6V1G2-DDX39BF2Z307 99 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 FPR1P21462 350 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ATN1P54259 1190 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 PSMD4P55036 377 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 CDC20Q12834 499 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ITPK1Q13572 414 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TEFMQ96QE5 360 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 PER2O15055 1255 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CDRT1O95170 752 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 RNASE12Q5GAN4 147 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 ENPP6Q6UWR7 440 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 STK40Q8N2I9 435 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 CHST13Q8NET6 341 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ABCB8Q9NUT2 735 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 KIAA0513O60268 411 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 EEDO75530 441 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 HMBSP08397 361 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 C11orf65Q8NCR3 313 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 KMOO15229 486 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 GTF2E2P29084 291 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 TAF6P49848 677 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ERVK-8P63133 956 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 FAM117BQ6P1L5 589 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TMIEQ8NEW7 156 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TMEM203Q969S6 136 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SMURF1Q9HCE7 757 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 SLC1A2P43004 574 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 KIR3DL1P43629 444 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 PGDP52209 483 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ZNF460Q14592 562 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 NFE2Q16621 373 aaPredicted RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 ZNF516Q92618 1163 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 GTF2H4Q92759 462 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 ZNF285Q96NJ3 590 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 TBC1D17Q9HA65 648 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 MAT2BQ9NZL9 334 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 DYRK1BQ9Y463 629 aa7.76□□□□□ -1.17
SMG1-202ENST00000446231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.76□□□□□ -1.17
SMG1-202ENST00000446231 EPB42P16452 691 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms