RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 BUB3O43684 328 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 BUD23O43709 281 aaKnown RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 BCL10O95999 233 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 TFAP2AP05549 437 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 F7P08709 466 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 NR1D1P20393 614 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 AHRP35869 848 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 IL15P40933 162 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ARSEP51690 589 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 GAS1P54826 345 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 DLX5P56178 289 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 MELKQ14680 651 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 KCTD2Q14681 263 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 KIR2DS5Q14953 304 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF672Q499Z4 452 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 DHRS7BQ6IAN0 325 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF852Q6ZMS4 543 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 C18orf65Q6ZTR6 163 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 CEP57Q86XR8 500 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 GUF1Q8N442 669 aaKnown RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 CCDC89Q8N998 374 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 SYT2Q8N9I0 419 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 WDR20Q8TBZ3 569 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF622Q969S3 477 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF582Q96NG8 517 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 SERINC2Q96SA4 455 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 SLX1AQ9BQ83 275 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 SLF1Q9BQI6 1058 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 C16orf70Q9BSU1 422 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 LRRC1Q9BTT6 524 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 KLHL4Q9C0H6 718 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 MMP27Q9H306 513 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 TRPC7Q9HCX4 862 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 CHMP1AQ9HD42 196 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 GDE1Q9NZC3 331 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 CRNNQ9UBG3 495 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 POLG2Q9UHN1 485 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 IQGAP3Q86VI3 1631 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 EIF2AK4Q9P2K8 1649 aaKnown RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ABCC1P33527 1531 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 MAGI2Q86UL8 1455 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 KIF7Q2M1P5 1343 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 ERCC6L2Q5T890 1561 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 C16orf97H3BN30 126 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 XPNPEP2O43895 674 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 CSPG5O95196 566 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 BMP10O95393 424 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 TPOP07202 933 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF23P17027 643 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 SIRPAP78324 504 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 PITX1P78337 314 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 POU3F1Q03052 451 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 KRT33BQ14525 404 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZRSR1Q15695 479 aaKnown RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF718Q3SXZ3 478 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 TEX38Q6PEX7 206 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 PIWIL4Q7Z3Z4 852 aaKnown RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 NR2C2APQ86WQ0 139 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 OR8H2Q8N162 312 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 MAB21L3Q8N8X9 362 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 APPL2Q8NEU8 664 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 PPP4R1Q8TF05 950 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 SEMA4DQ92854 862 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 OXNAD1Q96HP4 312 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 PRMT6Q96LA8 375 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 MRPL1Q9BYD6 325 aaKnown RBP4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 FKRPQ9H9S5 495 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 NPAP1Q9NZP6 1156 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 MORF4L1Q9UBU8 362 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 TTLL3Q9Y4R7 772 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 FAM169AQ9Y6X4 670 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 PLCH2O75038 1416 aa4.29□□□□□ -1.72
HMGB3P6-201ENST00000444896 LAMC1P11047 1609 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 A6NL46 340 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 DVL1O14640 695 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 P4HA2O15460 535 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 SYNGR3O43761 229 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 CTSVO60911 334 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 KRT36O76013 467 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 BAG4O95429 457 aaKnown RBP4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 KRT19P08727 400 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 AMD1P17707 334 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 FMO5P49326 533 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 MMP15P51511 669 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 SNRPEP62304 92 aaKnown RBP4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 PRKAA1Q13131 559 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 SIRPB2Q5JXA9 342 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 DENND5BQ6ZUT9 1274 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 PTOV1Q86YD1 416 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 NME8Q8N427 588 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 FBXO39Q8N4B4 442 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 OR13A1Q8NGR1 328 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 SMPDL3BQ92485 455 aa4.28□□□□□ -1.72
HMGB3P6-201ENST00000444896 LPGAT1Q92604 370 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms