RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 UBE2IP63279 158 aaKnown RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PDE1BQ01064 536 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 FOXM1Q08050 763 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 SRSF6Q13247 344 aaKnown RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 OLIG2Q13516 323 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PTPRCAPQ14761 206 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TAF1AQ15573 450 aaPredicted RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ZRSR2Q15696 482 aaKnown RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ANKS6Q68DC2 871 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM220Q6QAJ8 160 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ABRAXAS1Q6UWZ7 409 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 RANBP10Q6VN20 620 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 DET1Q7L5Y6 550 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 DTX1Q86Y01 620 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 RASGEF1AQ8N9B8 481 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 FAM71DQ8N9W8 422 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 BBOF1Q8ND07 529 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 DTX3LQ8TDB6 740 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PMEPA1Q969W9 287 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF514Q96K75 400 aaPredicted RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TGM7Q96PF1 710 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 TEFMQ96QE5 360 aaKnown RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 CTRCQ99895 268 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 DDA1Q9BW61 102 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ASB8Q9H765 288 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF624Q9P2J8 865 aaPredicted RBP8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PDP2Q9P2J9 529 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 PSMD13Q9UNM6 376 aa8.59□□□□□ -1.03
USP6NL-203ENST00000443016 B4E171 279 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 POLR1CO15160 346 aaPredicted RBP8.58□□□□□ -1.04
USP6NL-203ENST00000443016 KLF4O43474 513 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 KCNJ13O60928 360 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 TUBBP07437 444 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 RHOXF2BP0C7M4 288 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 BRAFP15056 766 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 TSPAN7P41732 249 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 CALCOCO2Q13137 446 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 PLCL1Q15111 1095 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 CEACAM20Q6UY09 585 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 ARHGAP22Q7Z5H3 698 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 ZNF605Q86T29 641 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 CACNA2D3Q8IZS8 1091 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 DDHD1Q8NEL9 900 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 WBP1Q96G27 269 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 DCUN1D1Q96GG9 259 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 RHOXF2Q9BQY4 288 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 LRRC1Q9BTT6 524 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 CRLS1Q9UJA2 301 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 MYO18BQ8IUG5 2567 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.58□□□□□ -1.04
USP6NL-203ENST00000443016 CAPN5O15484 640 aaPredicted RBP8.58□□□□□ -1.04
USP6NL-203ENST00000443016 SRP72O76094 671 aaKnown RBP8.58□□□□□ -1.04
USP6NL-203ENST00000443016 RALBP11234 206 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 HADHAP40939 763 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 PTGIRP43119 386 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 SEPHS1P49903 392 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 CTSCP53634 463 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 GFERP55789 205 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 TMPRSS15P98073 1019 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 GPR18Q14330 331 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 SPARCL1Q14515 664 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 IRGCQ6NXR0 463 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 PCSK4Q6UW60 755 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 WASH2PQ6VEQ5 465 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 RBM12BQ8IXT5 1001 aaKnown RBP8.58□□□□□ -1.04
USP6NL-203ENST00000443016 IFT20Q8IY31 132 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 LRRN4CLQ8ND94 238 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 TBL1YQ9BQ87 522 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 ERP44Q9BS26 406 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 TRIM51Q9BSJ1 452 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 UCK1Q9HA47 277 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 SLC40A1Q9NP59 571 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 WASH6PQ9NQA3 447 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 IMP3Q9NV31 184 aaKnown RBP8.58□□□□□ -1.04
USP6NL-203ENST00000443016 FKBPLQ9UIM3 349 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 WDR37Q9Y2I8 494 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 SLC30A1Q9Y6M5 507 aa8.58□□□□□ -1.04
USP6NL-203ENST00000443016 A6NJY4 79 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 FDFT1P37268 417 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 VPS41P49754 854 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 CYP4F2P78329 520 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 NFE2L1Q14494 772 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 CLCA4Q14CN2 919 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 AGAP9Q5VTM2 703 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 KLHL35Q6PF15 583 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 MYO1HQ8N1T3 1032 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 ZNF843Q8N446 348 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 BEND7Q8N7W2 519 aaPredicted RBP8.57□□□□□ -1.04
USP6NL-203ENST00000443016 OR13C4Q8NGS5 318 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 TTC9Q92623 222 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 EXTL1Q92935 676 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 NKD1Q969G9 470 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 KIAA1143Q96AT1 154 aaPredicted RBP8.57□□□□□ -1.04
USP6NL-203ENST00000443016 ZDHHC12Q96GR4 267 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 SNF8Q96H20 258 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 C9orf72Q96LT7 481 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 ZPBPQ9BS86 351 aa8.57□□□□□ -1.04
USP6NL-203ENST00000443016 FAM129AQ9BZQ8 928 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms