RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KIAA1671Q9BY89 1806 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 A0A1B0GVG6 124 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM114B3SHH9 223 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC22A2O15244 555 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 YKT6O15498 198 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 FLRT2O43155 660 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 DNAJA2O60884 412 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TFAP2AP05549 437 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 KITP10721 976 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 C6P13671 934 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 UQCRBP14927 111 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 NBL1P41271 181 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 WNT3AP56704 352 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZBTB17Q13105 803 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 INPP5AQ14642 412 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 POU6F1Q14863 301 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPANXN3Q5MJ09 141 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 GRTP1Q5TC63 336 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 LPCAT4Q643R3 524 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 NEK5Q6P3R8 708 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PARS2Q7L3T8 475 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 DET1Q7L5Y6 550 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ADCK2Q7Z695 626 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CMC1Q7Z7K0 106 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 LINC00523Q86TU6 105 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PARGQ86W56 976 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM129CQ86XR2 697 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 LMNTD2Q8IXW0 634 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 MOCOSQ96EN8 888 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 DUSP23Q9BVJ7 150 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 YIPF2Q9BWQ6 316 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 IL22Q9GZX6 179 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 OCEL1Q9H607 264 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 SOHLH2Q9NX45 425 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 OR1A2Q9Y585 309 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 H0Y8X5 98 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 KLHL2O95198 593 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ERVK-10P10266 1014 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ACP5P13686 325 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC2A4P14672 509 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 TPH1P17752 444 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 IDSP22304 550 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 VIPR1P32241 457 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ADRA1AP35348 466 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 HOXD12P35452 270 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 SESN3P58005 492 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 MS4A2Q01362 244 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 KLF10Q13118 480 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 PLA2G4EQ3MJ16 856 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 CCDC153Q494R4 210 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 AFMIDQ63HM1 303 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 HPS6Q86YV9 775 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 DCP2Q8IU60 420 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 POU5F2Q8N7G0 328 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 PYDC1Q8WXC3 89 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARRDC3Q96B67 414 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 BTBD9Q96Q07 612 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 GPR22Q99680 433 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 GLOD4Q9HC38 313 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 TNFRSF12AQ9NP84 129 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 LATS2Q9NRM7 1088 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 IMP3Q9NV31 184 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 MAP10Q9P2G4 905 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ANGPTL2Q9UKU9 493 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 SNX11Q9Y5W9 270 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ZNF106Q9H2Y7 1883 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 RRP8O43159 456 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 COQ9O75208 318 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC35E2BP0CK96 405 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 COX4I1P13073 169 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 CSTF2P33240 577 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 GRIA4P48058 902 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 MAPK10P53779 464 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 FOXM1Q08050 763 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 GALNT2Q10471 571 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 IHHQ14623 411 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 LIN52Q52LA3 116 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 PDPK2PQ6A1A2 396 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 USP53Q70EK8 1073 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 MFSD2AQ8NA29 543 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 ITFG2Q969R8 447 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 PSKH2Q96QS6 385 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 KIFC1Q9BW19 673 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 DRC3Q9H069 523 aa7.27□□□□□ -1.25
CDC42BPA-208ENST00000442054 A0A1W2PQF6 199 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TRIM64CA6NLI5 447 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 A8MU76 341 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 LRP3O75074 770 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 NDST3O95803 873 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 IGLV3-27P01718 113 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 GP5P40197 560 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 CCR10P46092 362 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 AP2B1P63010 937 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 ARF5P84085 180 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 SLC14A2Q15849 920 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 MANEALQ5VSG8 457 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 TMEM215Q68D42 235 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 KLHL35Q6PF15 583 aa7.26□□□□□ -1.25
CDC42BPA-208ENST00000442054 DHRS13Q6UX07 377 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms