RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TMEFF2Q9UIK5 374 aaPredicted RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 CAB39Q9Y376 341 aaPredicted RBP19.98■□□□□ 0.79
SHOX2-203ENST00000441443 TNPO2O14787 897 aaKnown RBP19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SLC7A4O43246 635 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 GRK3P35626 688 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SEMA3AQ14563 771 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 IHHQ14623 411 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 TSNQ15631 228 aaKnown RBP19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SV2CQ496J9 727 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 UBXN11Q5T124 520 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 C2orf69Q8N8R5 385 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 KLHL5Q96PQ7 755 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 ZBTB20Q9HC78 741 aaPredicted RBP19.97■□□□□ 0.79
SHOX2-203ENST00000441443 USE1Q9NZ43 259 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 PCDHGB1Q9Y5G3 927 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SLC2A3P11169 496 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 TSPY1Q01534 308 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF33AQ06730 810 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 XKR7Q5GH72 579 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 EID3Q8N140 333 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SVOPQ8N4V2 548 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 HASPINQ8TF76 798 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 FAM162AQ96A26 154 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 EMILIN2Q9BXX0 1053 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 MFSD1Q9H3U5 465 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 CASTOR2A6NHX0 329 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 NTRK1P04629 796 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 CYP11A1P05108 521 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 G6PDP11413 515 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 CD36P16671 472 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 MZF1P28698 734 aaPredicted RBP19.97■□□□□ 0.79
SHOX2-203ENST00000441443 GRIK2Q13002 908 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 LACC1Q8IV20 430 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SYTL1Q8IYJ3 562 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 SVOPLQ8N434 492 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 ZNF540Q8NDQ6 660 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 TTC16Q8NEE8 873 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 ELMO1Q92556 727 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 PCED1BQ96HM7 432 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 RNF38Q9H0F5 515 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 RIBC2Q9H4K1 309 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 IKZF5Q9H5V7 419 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 TRPV5Q9NQA5 729 aa19.97■□□□□ 0.79
SHOX2-203ENST00000441443 EFCAB9A8MZ26 197 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 CDC7O00311 574 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 ECI2O75521 394 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 CCNKO75909 580 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 LCKP06239 509 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 WARSP23381 471 aaKnown RBP19.96■□□□□ 0.79
SHOX2-203ENST00000441443 SYT16Q17RD7 645 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 DET1Q7L5Y6 550 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 BHLHA9Q7RTU4 235 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 LRRC49Q8IUZ0 686 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 BCL7BQ9BQE9 202 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 ZIM2Q9NZV7 527 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 OR4F21O95013 312 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 RYKP34925 604 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 GRIK1P39086 918 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 SLC35A2P78381 396 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 DSC2Q02487 901 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 SYT6Q5T7P8 510 aaPredicted RBP19.96■□□□□ 0.79
SHOX2-203ENST00000441443 PAQR3Q6TCH7 311 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 CELF2-AS1Q8N7Q2 184 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 PYCR2Q96C36 320 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 BARD1Q99728 777 aaKnown RBP19.96■□□□□ 0.79
SHOX2-203ENST00000441443 DCSTAMPQ9H295 470 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 TBC1D14Q9P2M4 693 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 OPTCQ9UBM4 332 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 OSGIN1Q9UJX0 560 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 ASB1Q9Y576 335 aa19.96■□□□□ 0.79
SHOX2-203ENST00000441443 C17orf102A2RUQ5 167 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 H0Y626 953 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 PTGESO14684 152 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 TRIM16O95361 564 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 PIRTP0C851 137 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 CA8P35219 290 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 NRG1Q02297 640 aaPredicted RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 TAF1CQ15572 869 aaPredicted RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 HEATR4Q86WZ0 1026 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 ELMOD1Q8N336 334 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 DPP10Q8N608 796 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 NCLNQ969V3 563 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 PAAF1Q9BRP4 392 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 ORC6Q9Y5N6 252 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 UBA6A0AVT1 1052 aaPredicted RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 MBLAC1A4D2B0 266 aaPredicted RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 NOTOA8MTQ0 251 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 RGS13O14921 159 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 IDH3BO43837 385 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 MOCS2O96007 188 aaPredicted RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 HOXD8P13378 290 aaPredicted RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 PNPLA4P41247 253 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 CLK1P49759 484 aaKnown RBP19.95■□□□□ 0.78
SHOX2-203ENST00000441443 MAP2K5Q13163 448 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 Q6ZSR9 355 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 RHEBL1Q8TAI7 183 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 RHBDF1Q96CC6 855 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 ACTL8Q9H568 366 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 WDR70Q9NW82 654 aa19.95■□□□□ 0.78
SHOX2-203ENST00000441443 NEUROG3Q9Y4Z2 214 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms