RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 PAFAH2Q99487 392 aa3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 ABHD6Q9BV23 337 aa3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 FNDC11Q9BVV2 318 aa3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 SIX2Q9NPC8 291 aa3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 GAGE2DQ9UEU5 116 aa3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 ADD3Q9UEY8 706 aaKnown RBP3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 PLAGL1Q9UM63 463 aa3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 EXO1Q9UQ84 846 aaKnown RBP3.29□□□□□ -1.88
PGBD4P3-201ENST00000440731 RSF1Q96T23 1441 aaPredicted RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 MED19A0JLT2 244 aaPredicted RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 DNM1LO00429 736 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 NTN3O00634 580 aaPredicted RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 TO15178 435 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 SLC22A2O15244 555 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 XRCC3O43542 346 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 SSX4O60224 188 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 CSPG5O95196 566 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 HMBSP08397 361 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 LIFP15018 202 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 PRLRP16471 622 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 HOXC8P31273 242 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 CEACAM8P31997 349 aaPredicted RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 NAP1L1P55209 391 aaKnown RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 SP3Q02447 781 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 DMPKQ09013 629 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 PPIGQ13427 754 aaKnown RBP eCLIP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 MELKQ14680 651 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 RILPL1Q5EBL4 403 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 TMCO3Q6UWJ1 677 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 SZRD1Q7Z422 152 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 ISCA2Q86U28 154 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 TAGAPQ8N103 731 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 ZNF383Q8NA42 475 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 HCAR2Q8TDS4 363 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 SLC47A1Q96FL8 570 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 DACH2Q96NX9 599 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 MYADMQ96S97 322 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 RTP3Q9BQQ7 232 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 C16orf70Q9BSU1 422 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 ANP32EQ9BTT0 268 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 GHITMQ9H3K2 345 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 LARSQ9P2J5 1176 aaKnown RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 SUCLA2Q9P2R7 463 aaPredicted RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 RHCGQ9UBD6 479 aa3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 PTRH2Q9Y3E5 179 aaKnown RBP3.28□□□□□ -1.88
PGBD4P3-201ENST00000440731 A0A1W2PRB8 838 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 A8MV72 311 aaPredicted RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 CDRT15L2A8MXV6 281 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 PSMD14O00487 310 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF197O14709 1029 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 GJB3O75712 270 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 BCL10O95999 233 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 PLA2G4BP0C869 781 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 VPREB1P12018 145 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 GJA1P17302 382 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 PSMB10P40306 273 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 NRIP1P48552 1158 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 TPD52P55327 224 aaPredicted RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 PMP22Q01453 160 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 AIMP2Q13155 320 aaKnown RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 TMEM187Q14656 261 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 DUSP28Q4G0W2 176 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 DCAF10Q5QP82 559 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 CYP4A22Q5TCH4 519 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF772Q68DY9 489 aaPredicted RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 HAUS6Q7Z4H7 955 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF554Q86TJ5 538 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 LDB1Q86U70 411 aaPredicted RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 APLFQ8IW19 511 aaPredicted RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 MCEMP1Q8IX19 187 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 POC5Q8NA72 575 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 TRIM58Q8NG06 486 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 OR2AJ1Q8NGZ0 328 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 LRRC59Q96AG4 307 aaKnown RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 CALML4Q96GE6 196 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 OR6C1Q96RD1 312 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 SLC22A12Q96S37 553 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 CDRT15Q96T59 188 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 PPIL3Q9H2H8 161 aaKnown RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 KCNK15Q9H427 330 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 ACKR4Q9NPB9 350 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 OSER1Q9NX31 292 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 COQ3Q9NZJ6 369 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 SEC63Q9UGP8 760 aaKnown RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 VPS28Q9UK41 221 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZHX1Q9UKY1 873 aaPredicted RBP3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 RIPK3Q9Y572 518 aa3.27□□□□□ -1.89
PGBD4P3-201ENST00000440731 IGKV3D-15A0A087WSY6 115 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 IGLV9-49A0A0B4J1Y8 123 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 hCG_1807616A0A1W2PRN6 198 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 LNP1A1A4G5 178 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 OR2A25A4D2G3 310 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 NR5A2O00482 541 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 SH2B2O14492 632 aaPredicted RBP3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 AVILO75366 819 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF821O75541 412 aaPredicted RBP3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 ZNF883P0CG24 379 aa3.26□□□□□ -1.89
PGBD4P3-201ENST00000440731 CEACAM1P13688 526 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms