RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RCAN2Q14206 197 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 FXNQ16595 210 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 CATSPEREQ5SY80 951 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 TMEM207Q6UWW9 146 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 TAS1R1Q7RTX1 841 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 LACC1Q8IV20 430 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 PTGR2Q8N8N7 351 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 PNPLA1Q8N8W4 532 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 PSMA8Q8TAA3 256 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 DYNC2LI1Q8TCX1 351 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 C18orf25Q96B23 403 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 TSGA13Q96PP4 275 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ASB2Q96Q27 587 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 TMEM175Q9BSA9 504 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 BTBD2Q9BX70 525 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 WDR6Q9NNW5 1121 aaKnown RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 LEF1Q9UJU2 399 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 OBSL1O75147 1896 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ILVBLA1L0T0 632 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 LRRC14BA6NHZ5 514 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 CCDC154A6NI56 674 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 A6NL46 340 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 NOBOXO60393 691 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 LILRB3O75022 631 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ANXA9O76027 345 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SIX3O95343 332 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 C1RP00736 705 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 GSNP06396 782 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 GRK3P35626 688 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ALDH7A1P49419 539 aaKnown RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 AIF1P55008 147 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 NFKB2Q00653 900 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 EMX2Q04743 252 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 EPS8Q12929 822 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 KCNAB2Q13303 367 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 BEND5Q7L4P6 421 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 PAGE2Q7Z2X7 111 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 RALGPS2Q86X27 583 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 CCDC117Q8IWD4 279 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 LILRB4Q8NHJ6 448 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 RHOXF1Q8NHV9 184 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 MRPL38Q96DV4 380 aaKnown RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 IGSF21Q96ID5 467 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ZBP1Q9H171 429 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 PLEKHA5Q9HAU0 1116 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ABCB10Q9NRK6 738 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
HPS4-206ENST00000439453 MAGEL2Q9UJ55 1249 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 FBXW11Q9UKB1 542 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 BRWD1Q9NSI6 2320 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 RFPL2O75678 378 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 EIF2DP41214 584 aaKnown RBP8.43□□□□□ -1.06
HPS4-206ENST00000439453 ZFP36L2P47974 494 aaKnown RBP8.43□□□□□ -1.06
HPS4-206ENST00000439453 IST1P53990 364 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 PHC1P78364 1004 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 CHRNB3Q05901 458 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ACOX1Q15067 660 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 FAM98BQ52LJ0 330 aaKnown RBP8.43□□□□□ -1.06
HPS4-206ENST00000439453 KDELC2Q7Z4H8 507 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ITFG1Q8TB96 612 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 CALML6Q8TD86 181 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 POF1BQ8WVV4 589 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 RORBQ92753 470 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 PTERQ96BW5 349 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 FCRL5Q96RD9 977 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 OSBPL10Q9BXB5 764 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 SLCO3A1Q9UIG8 710 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 GREB1Q4ZG55 1949 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 MIA3Q5JRA6 1907 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ISPDA4D126 451 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 UPK1BO75841 260 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ENO2P09104 434 aaPredicted RBP8.43□□□□□ -1.06
HPS4-206ENST00000439453 PAX3P23760 479 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ADRA1AP35348 466 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 CDKN2DP55273 166 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ARPC4P59998 168 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ISL1P61371 349 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 UFM1P61960 85 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 UPP1Q16831 310 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ANKRD34AQ69YU3 496 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 SULT1C3Q6IMI6 304 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ARHGAP36Q6ZRI8 547 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 SPATA19Q7Z5L4 167 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 LYSMD2Q8IV50 215 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 RAVER1Q8IY67 606 aaKnown RBP8.43□□□□□ -1.06
HPS4-206ENST00000439453 LGI2Q8N0V4 545 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 DTWD1Q8N5C7 304 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 LRRC52Q8N7C0 313 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 BEST2Q8NFU1 509 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 VN1R2Q8NFZ6 395 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 PJA1Q8NG27 643 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 YIPF6Q96EC8 236 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
HPS4-206ENST00000439453 LRRC3Q9BY71 257 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 GLOD4Q9HC38 313 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 EXD2Q9NVH0 621 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 TESMINQ9Y4I5 508 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 VPS4BO75351 444 aa8.43□□□□□ -1.06
HPS4-206ENST00000439453 PMPCBO75439 489 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms